Co-expression analysis

Gene ID GmaAffx.19179.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g11770: nucleic acid binding (HF=9e-1)
Module size 6 genes
NF 0.04
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.93GmaAffx.19179.1.S1_atBM528604--9e-1At3g11770nucleic acid bindingO.I.H.G.S.X.
0.3650.80.97GmaAffx.45956.1.S1_atBG238301--2e-4At1g17160pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.1721.20.97GmaAffx.65538.1.S1_s_atCA783421--2e+0At5g58260-O.I.H.G.S.X.
0.024.50.98Gma.11922.1.S1_atAW394565--3e+0At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.024.50.98GmaAffx.40735.1.S1_atBG315862MYB transcription factor MYB130-4e-7At3g49850TRB3 (TELOMERE REPEAT BINDING FACTOR 3)O.I.H.G.S.X.
0.013.40.98GmaAffx.71902.1.S1_atBE607717--3e-1At5g58680armadillo/beta-catenin repeat family proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.1GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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