Co-expression analysis

Gene ID GmaAffx.19179.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g11770: nucleic acid binding (HF=9e-1)
Module size 6 genes
NF 0.04
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.93GmaAffx.19179.1.S1_atBM528604--9e-1At3g11770nucleic acid bindingO.I.H.G.S.X.
0.3650.80.97GmaAffx.45956.1.S1_atBG238301--2e-4At1g17160pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.1721.20.97GmaAffx.65538.1.S1_s_atCA783421--2e+0At5g58260-O.I.H.G.S.X. (FH INTERACTING PROTEIN 1)O.I.H.G.S.X. transcription factor MYB130-4e-7At3g49850TRB3 (TELOMERE REPEAT BINDING FACTOR 3)O.I.H.G.S.X. repeat family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.1GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os03g0609500, orthologous to the query gene, GmaAffx.19179.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6181.2Os03g0609500At3g11770-Protein of unknown function DUF260 domaincontaining protein9e-6At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)O.I.H.G.S.X.
0.6079.7Os03g0332500At3g11770-60S ribosomal protein L10 (QM protein homolog)6e-1At2g35850unknown proteinO.I.H.G.S.X.
0.5068.0Os06g0692600At3g11770-Protein kinase domain containing protein3e-2At1g72300leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.149.3Os08g0462900At3g11770-Protein of unknown function DUF716 family protein5e-1At3g50580unknown proteinO.I.H.G.S.X.
0.116.5Os01g0287600At3g11770-Chitinase (Class II) (EC
0.073.7Os08g0562300At3g11770-Zn-finger, C2H2 type domain containing protein7e-4At5g22890zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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