Co-expression analysis

Gene ID GmaAffx.18444.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g35730: heavy-metal-associated domain-containing protein (HF=6e-1)
Module size 14 genes
NF 0.11
%ile 29.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.20.94GmaAffx.18444.1.S1_atBI469783--6e-1At2g35730heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3040.40.95GmaAffx.11375.1.S1_atBE659682--2e+0At1g16310cation efflux family proteinO.I.H.G.S.X.
0.2735.70.97GmaAffx.2747.1.S1_atAI460733--3e+0At1g05260RCI3 (RARE COLD INDUCIBLE GENE 3)O.I.H.G.S.X.
0.2735.70.96Gma.10423.1.S1_atBG652066--4e+0At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.2633.90.96Gma.6944.1.S1_atBI970468--2e-31At2g47490mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2633.90.96Gma.2720.1.S1_atBQ742519--8e-1At3g59450calcium-binding EF hand family proteinO.I.H.G.S.X.
0.2430.90.96Gma.8235.1.A1_atBU549558--1e+0At5g61920unknown proteinO.I.H.G.S.X.
0.1822.30.95Gma.6924.2.S1_a_atBM269793--1e-2At3g20310ERF7 (ETHYLINE RESPONSE FACTOR 7)O.I.H.G.S.X.
0.1721.20.96Gma.17366.1.S1_atBE823356--4e+0At5g63580FLS2 (FLAVONOL SYNTHASE 2)O.I.H.G.S.X.
0.1114.20.96GmaAffx.13035.1.A1_atBU544768--1e+0At1g55675unknown proteinO.I.H.G.S.X.
0.058.00.96Gma.7417.1.S1_atCD413494--1e-24At1g26300BSD domain-containing proteinO.I.H.G.S.X.
0.035.80.94Gma.12014.1.A1_atBG511748--4e-3At5g44316ATP-binding-cassette transporter, putativeO.I.H.G.S.X.
0.035.80.94Gma.2971.1.S1_s_atCD409358--1e-22At4g22220ISU1O.I.H.G.S.X.
0.035.80.95Gma.5028.1.S1_s_atBU760820--4e-21At1g02305cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.598.7GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
6.498.6GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.498.2GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
5.098.0GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.897.9GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.897.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.797.8GSM201119Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.397.5GSM191081Soybean_Cotyledon_EN1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.197.3GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.897.0GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.796.8GSM191082Soybean_Cotyledon_EN2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.796.8GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.496.4GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.496.4GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.396.2GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.396.2GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.296.0GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.095.6GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.095.6GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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