Co-expression analysis

Gene ID GmaAffx.17452.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g12370: ribosomal protein L10 family protein (HF=2e-1)
Module size 12 genes
NF 0.47
%ile 78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5576.30.84GmaAffx.17452.1.S1_atAW458587--2e-1At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.
0.6986.80.92GmaAffx.93356.1.S1_atCF807350--2e+0At5g47870unknown proteinO.I.H.G.S.X.
0.5678.20.89Gma.4438.4.S1_x_atBE021855--2e-1At5g63085-O.I.H.G.S.X.
0.5678.20.91GmaAffx.84058.1.A1_s_atCD396207--7e-4At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)O.I.H.G.S.X.
0.5678.20.92Gma.4438.1.S1_atCD396138--4e-5At5g24530DMR6 (DOWNY MILDEW RESISTANT 6)O.I.H.G.S.X.
0.5678.20.92Gma.4438.3.S1_x_atBU764535--8e-1At5g50050invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5678.20.93Gma.4438.2.S1_atBQ630502--5e+0At5g33330RNase H domain-containing proteinO.I.H.G.S.X.
0.5374.20.89GmaAffx.82048.1.S1_atBI320672--1e-2At4g13195CLE44 (CLAVATA3/ESR-RELATED 44)O.I.H.G.S.X.
0.4259.30.92Gma.7470.1.A1_atCD413105--4e-16At2g31880leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3954.50.89Gma.3367.1.S1_atBU083449--3e+0At2g27180unknown proteinO.I.H.G.S.X.
0.3142.20.90GmaAffx.56237.1.S1_atBU578491--4e-12At2g31880leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.2329.90.90GmaAffx.80842.1.S1_atBE440732--8e-1At5g60460sec61beta family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.099.0GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.898.7GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.897.9GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.897.0GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.496.4GSM29360333_2059.2B.R199L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29470871_2577.2M.R286U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.195.8GSM29469261_2589.2M.R273L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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