Co-expression analysis

Gene ID	GmaAffx.16523.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g36740: ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40) (HF=4e+0)
Module size	15 genes
NF	0.14
%ile	34.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.62	82.1	0.93	GmaAffx.16523.1.S1_at	CD411170	-	-	4e+0	At4g36740	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.95	GmaAffx.42446.1.S1_at	AW350699	-	-	1e-22	At1g08340	rac GTPase activating protein, putative	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.94	GmaAffx.24408.1.A1_at	BU548087	-	-	3e-8	At4g16610	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.95	GmaAffx.13005.1.A1_at	BU548292	-	-	5e+0	At3g13480	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.95	GmaAffx.82216.1.S1_at	BI967512	-	-	1e-26	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.96	GmaAffx.68001.1.S1_at	AW278976	-	-	8e-11	At1g68020	ATTPS6	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.96	GmaAffx.39699.2.S1_at	CA852256	-	-	2e-7	At3g02880	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.94	GmaAffx.37484.1.S1_at	BG651852	-	-	1e+0	At5g10210	-	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.94	GmaAffx.68191.1.S1_at	AW570288	-	-	4e-1	At2g21300	kinesin motor family protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.95	GmaAffx.43086.1.S1_at	BE819903	-	-	3e-2	At3g11400	eukaryotic translation initiation factor 3G / eIF3g	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.96	GmaAffx.16452.1.S1_at	AW351068	-	-	6e+0	At5g57500	transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.95	Gma.11367.1.S1_at	AW598213	-	-	8e-3	At5g16840	BPA1 (BINDINGPARTNEROFACD11 1)	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.94	Gma.894.1.A1_s_at	AW348752	glycosyltransferase	-	1e+1	At5g51790	basix helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.05	8.0	0.95	Gma.10206.1.S1_at	BU082029	-	-	2e-46	At2g21770	CESA9 (CELLULOSE SYNTHASE A9)	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.94	Gma.7894.1.S1_at	BU550913	-	-	1e-7	At4g38050	transmembrane transporter	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	95.6	GSM293952	9_3078.2E.SLE1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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