Co-expression analysis

Gene ID GmaAffx.16044.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g25710: kelch repeat-containing F-box family protein (HF=4e-2)
Module size 6 genes
NF 0.43
%ile 73.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4766.60.96GmaAffx.16044.1.S1_atAI460793--4e-2At4g25710kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.5576.30.97Gma.7226.2.S1_a_atBM887472mitogen-activated protein kinase 1-6e-63At3g45640ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3)O.I.H.G.S.X.
0.5071.70.96Gma.3730.2.S1_a_atBI320846transcription factor-9e-15At1g80840WRKY40O.I.H.G.S.X.
0.4057.10.97GmaAffx.50226.1.S1_atBG507971--4e-4At3g46600scarecrow transcription factor family proteinO.I.H.G.S.X.
0.2735.70.97GmaAffx.16384.1.S1_s_atAW307590Mitogen-activated protein kinase 1 (MAPK1)-1e+1At3g10830unknown proteinO.I.H.G.S.X.
0.2532.60.97Gma.6677.1.A1_s_atAW310551--2e-5At1g13890SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.7GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29241216_1250.1G.R155P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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