Co-expression analysis

Gene ID GmaAffx.15794.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g21500: 1-deoxy-D-xylulose-5-phosphate synthase (HF=8e-5)
Module size 7 genes
NF 0.53
%ile 84.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5576.30.83GmaAffx.15794.1.S1_atBM731379--8e-5At3g215001-deoxy-D-xylulose-5-phosphate synthaseO.I.H.G.S.X.
0.6786.10.86Gma.9069.2.S1_atBG882765geranyl-diphosphate synthase-3e+0At5g46730glycine-rich proteinO.I.H.G.S.X.
0.6382.90.83GmaAffx.27888.1.A1_atBI967168--5e-2At2g18870VEL3 (VERNALIZATION5/VIN3-LIKE)O.I.H.G.S.X.
0.5374.20.83GmaAffx.89049.1.S1_s_atCK606168--2e-1At2g38750ANNAT4 (ANNEXIN ARABIDOPSIS 4)O.I.H.G.S.X.
0.4463.30.84Gma.9069.1.S1_atCA782249geranyl-diphosphate synthase-4e-1At2g15590unknown proteinO.I.H.G.S.X.
0.4057.10.86GmaAffx.61222.1.S1_s_atBE803404--3e-1At2g38750ANNAT4 (ANNEXIN ARABIDOPSIS 4)O.I.H.G.S.X.
0.2735.70.86Gma.12678.1.A1_atCD394574--2e-1At4g22920NYE1 (NON-YELLOWING 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.999.2GSM17160812_Y.E.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.398.9GSM29284928_1443.1L.R271U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.198.8GSM29370037_3041.2C.SLC1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.898.7GSM29237952_C095.1F.SLF1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.998.5GSM29371954_3045.2C.SLC2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.698.3GSM29428941_3149.2I.SLI1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.598.3GSM17166626_V.E.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.498.2GSM29370844_3049.2C.SLC3U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM29237246_C097.1F.SLF2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.298.1GSM29398035_3101.2F.SLF2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.198.1GSM29303135_1055.1N.R032U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM29369129_3045.2C.SLC2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM29374578_3049.2C.SLC3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.998.0GSM17163218_W.E.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM29384887_2171.2D.R243U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM29425717_3149.2I.SLI1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM29243133_1263.1G.R167L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29396925_3101.2F.SLF2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM29245151_1263.1G.R167U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM29367817_3041.2C.SLC1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM17163018_Z.I.I.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.297.4GSM29425616_3159.2I.SLI3U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.197.3GSM29388839_3081.2E.SLE2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM17165322_Z.E.I.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.097.2GSM29399044_2245.2F.R272U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29466940_3227.2M.SLM2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29223129_C035.1B.SLB3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29236231_C095.1F.SLF1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29233581_1193.1E.R117U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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