Co-expression analysis

Gene ID	GmaAffx.15709.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g55580: regulator of chromosome condensation (RCC1) family protein (HF=8e-4)
Module size	6 genes
NF	0.61
%ile	90.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.95	GmaAffx.15709.1.S1_at	CB063343	-	-	8e-4	At3g55580	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.73	88.9	0.94	GmaAffx.77888.1.S1_at	BM086011	-	-	6e-14	At3g55580	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.73	88.9	0.95	GmaAffx.8717.1.S1_at	BG156862	-	-	7e-14	At3g55580	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.95	Gma.13371.1.A1_at	CD400116	-	-	4e+0	At1g63220	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.95	GmaAffx.6637.1.S1_at	AI900554	MYB transcription factor MYB186	-	8e-7	At1g01060	LHY (LATE ELONGATED HYPOCOTYL)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.95	GmaAffx.75245.1.S1_at	AI737035	-	-	2e-11	At5g27930	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	98.0	GSM293760	91_2140.2C.R244P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293836	76_2176.2D.R217P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293975	30_2284.2F.R188P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293959	16_2274.2F.R139P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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