Co-expression analysis

Gene ID	GmaAffx.15284.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g12880: proline-rich family protein (HF=9e-1)
Module size	31 genes
NF	0.44
%ile	74.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.87	93.2	0.97	GmaAffx.15284.2.S1_at	BU927192	-	-	9e-1	At5g12880	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.65	83.8	0.98	GmaAffx.88368.1.S1_at	CA801738	-	-	2e-8	At3g50670	U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)	O.I.	H.G.	S.X.	Please select
0.62	82.1	0.98	GmaAffx.69670.1.S1_at	BQ742118	-	-	7e-5	At4g22670	AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.97	GmaAffx.26272.1.S1_at	BE330107	-	-	6e-36	At1g43190	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.98	GmaAffx.15284.1.S1_at	BE822730	-	-	6e+0	At1g21880	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	GmaAffx.91473.1.S1_at	CF807198	-	-	3e-22	At4g28860	ckl4 (Casein Kinase I-like 4)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	Gma.15407.4.S1_at	AW185051	-	-	1e-21	At5g52040	ATRSP41	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	GmaAffx.40419.1.S1_at	BF325410	-	-	1e-11	At3g03570	-	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.98	GmaAffx.82131.1.S1_at	BQ473196	-	-	2e-2	At4g14860	atofp11 (Arabidopsis thaliana ovate family protein 11)	O.I.	H.G.	S.X.	Please select
0.51	72.3	0.98	GmaAffx.42058.1.S1_at	AW507617	-	-	3e-13	At1g61040	VIP5 (vernalization independence 5)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	GmaAffx.75287.1.S1_at	BM086047	-	-	2e-1	At4g01000	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.97	GmaAffx.67700.1.S1_at	CB063625	-	-	9e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.4382.3.S1_at	CA784372	-	-	9e-18	At1g18470	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.81052.2.S1_at	BM528722	-	-	6e-39	At3g58500	PP2A-3 (PROTEIN PHOSPHATASE 2A-3)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.85973.1.S1_at	BF424215	-	-	3e+0	At5g40630	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	GmaAffx.49506.1.S1_at	BF009815	-	-	2e+0	At2g19760	PRF1 (PROFILIN 1)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.4305.3.S1_a_at	BG044173	-	-	5e-8	At5g57940	ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.8643.2.S1_at	BG652817	-	-	1e-9	At3g09740	SYP71 (SYNTAXIN OF PLANTS 71)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.11850.2.S1_at	BQ630681	-	-	8e-18	At4g32850	nPAP (NUCLEAR POLY(A) POLYMERASE)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.12593.3.S1_at	AW756323	-	-	5e-34	At2g32170	-	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.92146.1.S1_s_at	CF807871	-	-	2e-42	At2g29580	zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	Gma.4995.2.S1_at	AW830184	-	-	3e-4	At5g13020	emsy N terminus domain-containing protein / ENT domain-containing protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	GmaAffx.61984.1.S1_at	BM523130	-	-	4e-9	At5g18810	SCL28	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.9020.2.S1_at	AI736080	-	-	1e-14	At2g43970	La domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.92886.1.S1_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	Gma.6196.2.S1_a_at	BI972744	-	-	2e-35	At2g14120	dynamin-like protein 2b (ADL2b)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.76624.1.S1_at	CA939046	-	-	6e-10	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.83691.1.S1_at	BQ743066	-	-	2e-3	At5g28070	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.82.1.S1_at	CD415578	-	-	9e-8	At3g10210	-	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	Gma.12030.3.S1_a_at	BG359479	-	-	4e+0	At3g47341	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.92886.1.S1_s_at	CF808611	-	-	3e-41	At5g09900	EMB2107 (EMBRYO DEFECTIVE 2107)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	95.8	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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