Co-expression analysis

Gene ID GmaAffx.15275.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g55790: unknown protein (HF=1e-2)
Module size 21 genes
NF 0.81
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.68GmaAffx.15275.1.A1_atBU761115--1e-2At3g55790unknown proteinO.I.H.G.S.X.
0.9093.70.88Gma.13259.2.S1_a_atAW277702MYB transcription factor MYB172-9e-4At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.H.G.S.X.
0.8893.40.87GmaAffx.55240.1.S1_atBM092410--6e-1At4g24540AGL24 (AGAMOUS-LIKE 24)O.I.H.G.S.X.
0.8793.20.86GmaAffx.74402.1.A1_atBU544670--7e+0At3g0219060S ribosomal protein L39 (RPL39B)O.I.H.G.S.X.
0.8693.00.84GmaAffx.52704.1.A1_atBE659242WRKY29 protein-3e+0At5g53720RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.8592.80.82Gma.17190.1.S1_atBQ628623--8e-14At2g39710aspartyl protease family proteinO.I.H.G.S.X.
0.8592.80.86GmaAffx.30709.1.S1_atBE059739--2e-1At1g35435-O.I.H.G.S.X.
0.8492.60.85Gma.13259.1.A1_a_atBU545412MYB transcription factor MYB172-2e-5At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.H.G.S.X.
0.8492.60.88GmaAffx.15861.1.S1_atCD418539--6e+0At4g02733-O.I.H.G.S.X.
0.8492.60.83GmaAffx.52594.1.S1_atBE058579--3e-4At1g17260AHA10 (Autoinhibited H(+)-ATPase isoform 10)O.I.H.G.S.X.
0.8492.60.85Gma.1163.1.S1_atAW423421Anthocyanidin synthase-3e-21At4g22880LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)O.I.H.G.S.X.
0.8291.90.82GmaAffx.49458.1.S1_atAW395346--1e+0At3g07190-O.I.H.G.S.X.
0.8291.90.81GmaAffx.60751.1.S1_atBE610338--1e+1At5g18160F-box family proteinO.I.H.G.S.X.
0.8091.50.84Gma.9089.1.A1_atBU544319--9e-8At4g19640ARA7O.I.H.G.S.X.
0.7990.80.82GmaAffx.49465.1.A1_atBE821938--3e+0At4g33750-O.I.H.G.S.X.
0.7890.60.83GmaAffx.52704.2.S1_atAW153168WRKY29 protein-6e-1At2g26930ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE)O.I.H.G.S.X.
0.7890.60.84GmaAffx.86037.1.S1_atBF597463--8e-1At5g11900eukaryotic translation initiation factor SUI1 family proteinO.I.H.G.S.X.
0.7790.30.83GmaAffx.29347.1.S1_atCA802338--7e-1At1g70840MLP31 (MLP-LIKE PROTEIN 31)O.I.H.G.S.X.
0.6583.80.79Gma.17066.1.S1_atAW185607--3e+0At5g25360unknown proteinO.I.H.G.S.X.
0.6483.40.86GmaAffx.67044.1.S1_atBE059104--2e+0At4g28780GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.6282.10.79Gma.8533.1.S1_atBE608504MYB transcription factor MYB115-7e-5At2g16720MYB7 (MYB DOMAIN PROTEIN 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.899.8GSM201124Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
21.799.8GSM201125Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
14.199.6GSM182040Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
13.899.5GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
13.199.5GSM182039Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
12.399.5GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
12.199.5GSM191083Soybean_Cotyledon_EPD1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
10.899.4GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
10.899.4GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
10.599.3GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
9.499.2GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
7.198.8GSM182042Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.098.5GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.598.3GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.897.9GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.697.7GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.497.6GSM191091Soybean_Cotyledon_SEED1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.197.3GSM182048Whole Seed at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.197.3GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.097.2GSM182047Whole Seed at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.097.2GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.696.7GSM201129Whole Seed at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.496.4GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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