Co-expression analysis

Gene ID	GmaAffx.14915.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g66260: RNA and export factor-binding protein, putative (HF=3e-5)
Module size	25 genes
NF	0.29
%ile	55.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.89	93.5	0.97	GmaAffx.14915.1.S1_at	BE057713	-	-	3e-5	At1g66260	RNA and export factor-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.97	Gma.13170.1.S1_at	CD407100	-	-	1e-2	At5g65210	TGA1	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	Gma.7365.2.A1_a_at	BE823623	-	-	5e-2	At5g46750	AGD9 (ARF-GAP DOMAIN 9)	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.51470.1.S1_at	CD390659	-	-	6e-27	At2g30710	RabGAP/TBC domain-containing protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.97	Gma.7945.1.S1_at	BU551250	-	-	2e-36	At5g16040	regulator of chromosome condensation (RCC1) family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.7581.1.S1_at	BI969748	-	-	1e-2	At5g13300	SFC (SCARFACE)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.9584.1.A1_s_at	BU544192	-	-	2e-5	At3g52640	nicastrin-related	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	GmaAffx.66034.1.S1_at	AW351123	-	-	3e-4	At5g11030	ALF4 (ABERRANT LATERAL ROOT FORMATION 4)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	Gma.17588.2.S1_a_at	AW351318	-	-	9e-1	Atmg00860	-	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	Gma.7461.1.A1_at	BU547859	-	-	4e-1	At4g26290	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	Gma.1806.1.S1_at	BI971557	-	-	5e-26	At2g23980	ATCNGC6	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.74603.1.S1_at	AI899767	-	-	3e-36	At3g46290	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.10673.1.A1_at	BU762737	-	-	6e-6	At3g26950	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	Gma.1602.1.S1_x_at	BI971053	-	-	2e-171	At3g50000	CKA2 (CASEIN KINASE II, ALPHA CHAIN 2)	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.98	Gma.6024.2.S1_at	CD405001	-	-	6e-1	At1g20760	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.46850.1.S1_at	AW164691	-	-	5e+0	At3g53070	beta-galactosidase-related	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.2357.1.S1_at	CD391218	-	-	9e-9	At1g76940	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.3678.1.S1_at	BE806981	-	-	6e+0	At5g46570	BSK2 (BR-SIGNALING KINASE 2)	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	GmaAffx.38442.1.S1_s_at	BU549565	-	-	2e-9	At4g17620	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	Gma.16690.1.S1_at	BQ611311	-	-	9e-40	At3g57890	tubulin-specific chaperone C-related	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	GmaAffx.38649.1.S1_at	AW349731	-	-	4e-17	At5g40440	ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.10781.1.S1_a_at	AW101008	-	-	7e-29	At2g38630	-	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.867.1.S1_at	AI442971	-	-	4e-27	At1g01160	SSXT protein-related / transcription co-activator-related	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.4412.1.S1_x_at	L28002.1	TATA-box binding protein	-	4e-51	At1g55520	TBP2 (TATA BINDING PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.3757.1.S1_at	CD405183	-	-	6e-53	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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