Co-expression analysis

Gene ID GmaAffx.14871.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01760: lysine and histidine specific transporter, putative (HF=9e-1)
Module size 6 genes
NF 0.61
%ile 90.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.97GmaAffx.14871.1.S1_atBG510693--9e-1At3g01760lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.7388.90.97GmaAffx.17305.1.S1_atBM524663--3e+0At5g61650CYCP4O.I.H.G.S.X.
0.6786.10.98Gma.7924.3.S1_a_atBI787925--2e-3At4g24290-O.I.H.G.S.X.
0.5678.20.97Gma.7924.3.S1_atBI787925--2e-3At4g24290-O.I.H.G.S.X.
0.4259.30.97GmaAffx.82626.1.S1_atBM108148--1e+0At5g25600-O.I.H.G.S.X.
0.4057.10.98GmaAffx.12540.1.S1_atBE474761--1e-6At1g33770protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.4GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM2940075_3095.2F.R9F1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.5938.2.A1_a_at, orthologous to the query gene, GmaAffx.14871.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6381.1Zm.5938.2.A1_a_atAt3g01760--8e-1At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)O.I.H.G.S.X.
0.9199.0Zm.9625.1.A1_x_atAt3g01760Hypothetical protein LOC100216879-3e-1At4g33660unknown proteinO.I.H.G.S.X.
0.8094.0Zm.5474.1.S1_atAt3g01760hypothetical protein LOC100194401-2e-3At4g11450unknown proteinO.I.H.G.S.X.
0.6785.8Zm.16853.1.A1_atAt3g01760--2e-18At5g05920DHS (DEOXYHYPUSINE SYNTHASE)O.I.H.G.S.X.
0.3844.2Zm.14057.2.S1_x_atAt3g01760--8e-20At4g22910FZR2 (FIZZY-RELATED 2)O.I.H.G.S.X.
0.3336.0Zm.4034.1.A1_atAt3g01760--3e-7At1g55680WD-40 repeat family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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