Co-expression analysis

Gene ID GmaAffx.14871.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01760: lysine and histidine specific transporter, putative (HF=9e-1)
Module size 6 genes
NF 0.61
%ile 90.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.97GmaAffx.14871.1.S1_atBG510693--9e-1At3g01760lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.7388.90.97GmaAffx.17305.1.S1_atBM524663--3e+0At5g61650CYCP4O.I.H.G.S.X.
0.6786.10.98Gma.7924.3.S1_a_atBI787925--2e-3At4g24290-O.I.H.G.S.X.
0.5678.20.97Gma.7924.3.S1_atBI787925--2e-3At4g24290-O.I.H.G.S.X.
0.4259.30.97GmaAffx.82626.1.S1_atBM108148--1e+0At5g25600-O.I.H.G.S.X.
0.4057.10.98GmaAffx.12540.1.S1_atBE474761--1e-6At1g33770protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.4GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM2940075_3095.2F.R9F1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1613837_at, orthologous to the query gene, GmaAffx.14871.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7792.31613837_atAt3g01760hypothetical protein LOC100248706-4e-4At1g47670amino acid transporter family proteinO.I.H.G.S.X.
0.9198.81613603_atAt3g01760hypothetical protein LOC100248706-1e-7At1g47670amino acid transporter family proteinO.I.H.G.S.X.
0.8093.61610600_atAt3g01760hypothetical protein LOC100242774 /// hypothetical protein LOC100248732 /// hypothetical protein LOC100253829-3e-1At3g08580AAC1 (ADP/ATP CARRIER 1)O.I.H.G.S.X.
0.6787.91617596_atAt3g01760hypothetical protein LOC100264999-1e+0At4g32590ferredoxin-relatedO.I.H.G.S.X.
0.6787.91617483_atAt3g01760hypothetical protein LOC100267019-1e+0At2g04170meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.3650.71609744_atAt3g01760hypothetical protein LOC100240811 /// hypothetical protein LOC100263073-2e+0At3g42630pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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