Co-expression analysis

Gene ID GmaAffx.14871.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01760: lysine and histidine specific transporter, putative (HF=9e-1)
Module size 6 genes
NF 0.61
%ile 90.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.97GmaAffx.14871.1.S1_atBG510693--9e-1At3g01760lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.7388.90.97GmaAffx.17305.1.S1_atBM524663--3e+0At5g61650CYCP4O.I.H.G.S.X.
0.6786.10.98Gma.7924.3.S1_a_atBI787925--2e-3At4g24290-O.I.H.G.S.X.
0.5678.20.97Gma.7924.3.S1_atBI787925--2e-3At4g24290-O.I.H.G.S.X.
0.4259.30.97GmaAffx.82626.1.S1_atBM108148--1e+0At5g25600-O.I.H.G.S.X.
0.4057.10.98GmaAffx.12540.1.S1_atBE474761--1e-6At1g33770protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.4GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM2940075_3095.2F.R9F1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os03g0172700, orthologous to the query gene, GmaAffx.14871.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8896.8Os03g0172700At3g01760-Hypothetical protein1e+0At2g40500protein kinase family proteinO.I.H.G.S.X.
0.7793.1Os04g0104200At3g01760--3e+0At5g64880unknown proteinO.I.H.G.S.X.
0.5676.3Os10g0164200At3g01760--4e-1At1g66360C2 domain-containing proteinO.I.H.G.S.X.
0.5573.7Os12g0569400At3g01760--7e+0Atcg00420-O.I.H.G.S.X.
0.5068.0Os11g0623300At3g01760--1e-3At2g11910unknown proteinO.I.H.G.S.X.
0.5068.0Os11g0418100At3g01760--6e-1At5g24655LSU4 (RESPONSE TO LOW SULFUR 4)O.I.H.G.S.X.
0.4964.4Os04g0331401At3g01760--6e-1At4g39260GR-RBP8O.I.H.G.S.X.
0.4253.9Os11g0676150At3g01760--9e-1At3g17626-O.I.H.G.S.X.
0.4253.9Os06g0276932At3g01760--3e+0At5g57000unknown proteinO.I.H.G.S.X.
0.3745.0Os11g0625700At3g01760-Hypothetical protein1e+0At5g41910RNA polymerase II mediator complex protein-relatedO.I.H.G.S.X.
0.3745.0Os07g0173800At3g01760--2e-1At1g22640MYB3 (MYB DOMAIN PROTEIN 3)O.I.H.G.S.X.
0.3541.7Os06g0124000At3g01760--3e+0At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.
0.3440.0Os04g0135200At3g01760--1e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)O.I.H.G.S.X.
0.3338.8Os08g0274800At3g01760--6e-3At2g46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinO.I.H.G.S.X.
0.3134.5Os12g0500500At3g01760-Disease resistance protein family protein4e-1At1g77890unknown proteinO.I.H.G.S.X.
0.3032.7Os12g0547000At3g01760--4e+0At2g37530unknown proteinO.I.H.G.S.X.
0.2931.1Os02g0301600At3g01760--3e+0At4g21926unknown proteinO.I.H.G.S.X.
0.2219.4Os01g0900400At3g01760-Lipase, class 3 family protein6e-1At3g27270-O.I.H.G.S.X.
0.2117.9Os05g0193700At3g01760-IQ calmodulin-binding region domain containingprotein2e-1At3g60020ASK5 (ARABIDOPSIS SKP1-LIKE 5)O.I.H.G.S.X.
0.2016.5Os08g0181900At3g01760--6e-1At1g10030ERG28 (Arabidopsis homolog of yeast ergosterol28)O.I.H.G.S.X.
0.2016.5Os04g0136000At3g01760--8e-2At5g43070WPP1 (WPP domain protein 1)O.I.H.G.S.X.
0.1813.7Os10g0562200At3g01760-Lipase-like protein8e-1At1g06800lipase class 3 family proteinO.I.H.G.S.X.
0.1813.7Os04g0293800At3g01760--1e+0At2g42820HVA22F (HVA22-LIKE PROTEIN F)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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