Co-expression analysis

Gene ID	GmaAffx.1411.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g20370: serine-rich protein-related (HF=2e-3)
Module size	16 genes
NF	0.42
%ile	72.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.65	83.8	0.95	GmaAffx.1411.1.S1_s_at	AW350832	-	-	2e-3	At5g20370	serine-rich protein-related	O.I.	H.G.	S.X.	Please select
0.76	89.7	0.96	Gma.17798.2.S1_at	CD412748	-	-	4e+0	At5g52480	-	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.96	Gma.16527.1.A1_at	BU547595	-	-	3e-1	At3g28420	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.96	Gma.17798.1.S1_at	BU084728	-	-	6e-22	At1g32700	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.51	72.3	0.97	Gma.12520.1.S1_at	CD394537	-	-	2e+0	At4g00030	plastid-lipid associated protein PAP / fibrillin family protein	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.97	Gma.4108.1.S1_s_at	BI701465	-	-	2e+0	At3g51410	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	Gma.3758.2.S1_at	BM524173	-	-	5e-20	At1g32700	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.96	Gma.9134.1.S1_at	CA801591	-	-	6e-12	At1g49180	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.97	GmaAffx.87532.1.S1_s_at	BG155694	-	-	9e-1	At2g24590	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.97	GmaAffx.52602.1.S1_at	BE658979	-	-	2e-1	At1g65000	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.96	GmaAffx.85352.1.S1_at	CD410050	-	-	6e+0	At4g05632	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.97	GmaAffx.4252.1.S1_at	BE822140	-	-	2e-9	At5g35560	DENN (AEX-3) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.97	Gma.3758.2.S1_x_at	BM524173	-	-	5e-20	At1g32700	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.97	Gma.10975.2.S1_s_at	BQ743096	-	-	5e-6	At3g21510	AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	Gma.16462.3.S1_at	AW781393	-	-	6e-21	At1g21760	FBP7 (F-BOX PROTEIN 7)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.97	Gma.15918.1.S1_x_at	BM519864	-	-	3e-70	At2g16570	ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.7	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293126	3_C038.1O.R9O1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292589	19_C160.1I.V7I3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294114	6_3114.2G.SLG1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292596	26_C146.1I.V7I1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292373	47_C104.1F.R9F3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293060	61_C034.1N.R9N3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292653	7_C156.1I.V7I2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292258	78_C034.1B.R9B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294059	17_3118.2G.R9G2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292890	65_C202.1L.R9L1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294145	10_3144.2H.V7H3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293718	53_2144.2C.R109P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294668	3_3218.2M.V7M1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294293	45_3162.2I.R9I3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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