Co-expression analysis

Gene ID	GmaAffx.12516.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g58460: ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15) (HF=3e-4)
Module size	6 genes
NF	0.40
%ile	70.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	91.5	0.98	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	GmaAffx.90426.1.S1_s_at	CF806151	urease accessory protein UreF	-	7e-7	At1g21840	UREF (urease accessory protein F)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.55210.2.S1_at	BE330623	-	-	3e-32	At2g43070	protease-associated (PA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.99	Gma.1760.3.S1_at	BM893205	-	-	5e-1	At2g36295	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.8062.2.S1_a_at	BG652071	-	-	4e-14	At2g21630	transport protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage