Co-expression analysis

Gene ID Gma.9233.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g00740: dehydration-responsive protein-related (HF=8e-21)
Module size 30 genes
NF 0.27
%ile 52.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.94Gma.9233.1.S1_atAW734649--8e-21At4g00740dehydration-responsive protein-relatedO.I.H.G.S.X.
0.4057.10.96GmaAffx.38590.1.S1_atCD414409--4e-1At4g39130dehydrin family proteinO.I.H.G.S.X.
0.4057.10.97Gma.17692.1.S1_atCD393918--1e-13At3g54560HTA11O.I.H.G.S.X.
0.3954.50.96Gma.4682.1.S1_atAW306683--1e-13At3g54560HTA11O.I.H.G.S.X.
0.3853.30.96Gma.9274.1.S1_atCA819534--8e-14At3g09840CDC48 (CELL DIVISION CYCLE 48)O.I.H.G.S.X.
0.3751.70.97Gma.4398.1.A1_atBQ081343--4e-1At2g27010CYP705A9O.I.H.G.S.X.
0.3650.80.96Gma.3256.2.S1_atBQ298351--2e-28At1g23750DNA-binding protein-relatedO.I.H.G.S.X.
0.3650.80.96Gma.14194.1.A1_atCD417566--5e-1At1g15360SHN1 (SHINE 1)O.I.H.G.S.X.
0.3650.80.96Gma.13332.1.S1_atAW459753--2e-97At5g18580FASS (FASS 1)O.I.H.G.S.X.
0.3548.60.97Gma.11054.1.A1_s_atBI970377--2e-1At1g64470ubiquitin family proteinO.I.H.G.S.X.
0.3548.60.97Gma.16950.1.S1_atBQ454216--3e+0At5g05330DNA bindingO.I.H.G.S.X.
0.3447.20.93GmaAffx.1301.110.A1_s_atCD399897--3e+0At5g44520ribose 5-phosphate isomerase-relatedO.I.H.G.S.X.
0.3346.10.97Gma.1973.2.A1_atBE823307--7e-1At4g25560AtMYB18 (myb domain protein 18)O.I.H.G.S.X.
0.3243.70.97GmaAffx.89630.1.A1_s_atCK606252--2e+0At1g11270F-box family proteinO.I.H.G.S.X.
0.3142.20.94GmaAffx.72797.1.S1_s_atAI966445--9e-1At5g06300carboxy-lyaseO.I.H.G.S.X.
0.3142.20.96Gma.12730.1.A1_atCD395792--3e+0At2g15890MEE14 (maternal effect embryo arrest 14)O.I.H.G.S.X.
0.3040.40.97Gma.14486.1.S1_atBI320417--2e+0At5g17340unknown proteinO.I.H.G.S.X.
0.2939.00.97Gma.10823.1.S1_a_atBE821852--3e-32At1g65220eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinO.I.H.G.S.X.
0.2939.00.96Gma.15990.1.S1_atBU081840--4e-1At1g71950identical protein binding / serine-type endopeptidaseO.I.H.G.S.X.
0.2939.00.96Gma.14833.1.S1_atAW350338--1e-2At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)O.I.H.G.S.X.
0.2839.00.97Gma.2609.2.A1_atAW311028--3e-9At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingO.I.H.G.S.X.
0.2839.00.96Gma.346.1.A1_atAI443539--8e-1At1g79590SYP52 (SYNTAXIN OF PLANTS 52)O.I.H.G.S.X.
0.2735.70.96Gma.2341.1.S1_a_atBQ610161--3e-80At4g31480coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeO.I.H.G.S.X.
0.2633.90.97Gma.10328.1.S1_x_atBE058328--3e+0At3g63190RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR)O.I.H.G.S.X.
0.2025.10.95Gma.13580.1.S1_s_atBQ611050Tubulin A-1e-116At1g50010TUA2O.I.H.G.S.X.
0.2025.10.96Gma.7169.1.A1_atBE658148--7e-9At5g16260RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1619.70.96GmaAffx.1301.31.S1_s_atBI317354--1e-11At1g30230elongation factor 1-beta / EF-1-betaO.I.H.G.S.X.
0.1316.30.96Gma.9661.1.S1_atBE329972--1e-10At1g55255-O.I.H.G.S.X.
0.1114.20.96GmaAffx.23184.2.A1_atBG651576--1e+0At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.S.X.
0.1013.00.95Gma.6698.2.A1_atBI968092--8e-1At1g70490ARFA1DO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.098.5GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.098.5GSM182042Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.998.5GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.898.4GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.898.4GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.698.3GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.698.3GSM147943Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.598.3GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.498.2GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.398.2GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.298.1GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.298.1GSM182036Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.298.1GSM191083Soybean_Cotyledon_EPD1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.298.1GSM182039Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.198.1GSM182040Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.198.1GSM182038Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.198.1GSM147955Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM191082Soybean_Cotyledon_EN2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.098.0GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.098.0GSM191081Soybean_Cotyledon_EN1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.098.0GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.998.0GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.998.0GSM201119Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.897.9GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.897.9GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.897.9GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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