Co-expression analysis

Gene ID Gma.9221.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g20480: unknown protein (HF=1e+0)
Module size 31 genes
NF 0.67
%ile 94.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8291.90.55Gma.9221.1.S1_atCD395134--1e+0At2g20480unknown proteinO.I.H.G.S.X.
0.8793.20.72Gma.3440.1.S1_s_atBE820653--5e+0At5g67010AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.8592.80.73Gma.1025.1.S1_atBE661296--2e+0At1g11970-O.I.H.G.S.X.
0.8492.60.73GmaAffx.13164.1.S1_atBF598049--8e-1At3g62380-O.I.H.G.S.X.
0.8291.90.60Gma.14167.1.A1_atCD416718--3e+0At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.7790.30.63GmaAffx.80413.1.A1_atAW620950--7e-1At4g36090oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.7689.70.79GmaAffx.75940.1.S1_atAW706687--9e+0At5g65330AGL78 (AGAMOUS-LIKE 78)O.I.H.G.S.X.
0.7589.50.80GmaAffx.21250.1.S1_atAW598021--7e-1At1g03630POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE)O.I.H.G.S.X.
0.7489.20.73Gma.17504.1.S1_atBF595106--2e-1At5g55200co-chaperone grpE protein, putativeO.I.H.G.S.X.
0.7388.90.78Gma.12837.1.A1_atCD392065--2e-1At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.7187.80.71GmaAffx.22396.1.S1_atBF597175--3e+0At5g11320YUC4 (YUCCA4)O.I.H.G.S.X.
0.7087.10.80GmaAffx.70956.1.S1_atAW185248--2e+0At1g343805'-3' exonuclease family proteinO.I.H.G.S.X.
0.6986.80.76Gma.17833.1.S1_atBE822643--1e-4At2g32990AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8)O.I.H.G.S.X.
0.6886.40.75GmaAffx.66589.1.S1_atBE821501--1e+0At5g20470myosin, putativeO.I.H.G.S.X.
0.6886.40.74GmaAffx.79846.1.S1_atAW277290--3e+0At1g02090FUS5 (FUSCA 5)O.I.H.G.S.X.
0.6786.10.72GmaAffx.34470.1.S1_atAW185011--3e+0At1g11765S1 self-incompatibility protein-relatedO.I.H.G.S.X.
0.6684.00.73Gma.17068.1.S1_atBE822432--1e+0At4g27030small conjugating protein ligaseO.I.H.G.S.X.
0.6483.40.65GmaAffx.10629.1.S1_s_atBU760664--2e+0At3g08010ATAB2O.I.H.G.S.X.
0.6382.90.81GmaAffx.53446.1.S1_atBE058820--2e-1At5g23590DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.6382.90.74GmaAffx.30011.1.S1_atAW164260--3e+0At5g65220ribosomal protein L29 family proteinO.I.H.G.S.X.
0.6382.90.64GmaAffx.35653.1.S1_atBE822293--3e-1At3g01970WRKY45O.I.H.G.S.X.
0.6282.10.81GmaAffx.25878.1.S1_atAW598559--4e-1At1g64370unknown proteinO.I.H.G.S.X.
0.6282.10.77GmaAffx.44070.1.S1_atAW706965--3e+0At4g21040Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.6181.80.71Gma.6781.1.S1_atBU764071--5e-2At5g40490RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5979.50.73GmaAffx.58294.1.A1_atBE822389--1e+0At1g34770MAGE-8 antigen-relatedO.I.H.G.S.X.
0.5678.20.69Gma.1819.1.S1_atBF596825--3e-4At2g30810gibberellin-regulated family proteinO.I.H.G.S.X.
0.5576.30.75Gma.8573.1.S1_atBU761073--8e-1At2g37760aldo/keto reductase family proteinO.I.H.G.S.X.
0.5474.80.70Gma.12474.1.S1_atAW703615--7e-1At1g29410PAI3 (phosphoribosylanthranilate isomerase 3)O.I.H.G.S.X.
0.5474.80.75Gma.1817.1.S1_s_atBU760738--1e+1At5g23740RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)O.I.H.G.S.X.
0.5273.10.75Gma.13629.1.A1_atCD402075--2e-1At4g23910unknown proteinO.I.H.G.S.X.
0.5273.10.70Gma.5425.1.S1_atBU761142--4e+0At5g25570unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.799.8GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
19.499.7GSM182036Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
18.799.7GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
18.699.7GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
17.199.7GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
11.699.4GSM147941Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
9.999.3GSM147940Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
8.199.0GSM147939Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
8.199.0GSM201119Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
7.999.0GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.596.6GSM191083Soybean_Cotyledon_EPD1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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