Co-expression analysis

Gene ID Gma.9143.1.A1_s_at
Gene name
Homology with ArabidopsisSimilar to At4g34660: SH3 domain-containing protein 2 (SH3P2) (HF=1e-15)
Module size 9 genes
NF 0.49
%ile 79.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.80.98Gma.9143.1.A1_s_atCD394216--1e-15At4g34660SH3 domain-containing protein 2 (SH3P2)O.I.H.G.S.X.
0.7187.80.98Gma.5168.1.S1_atCD391884--1e-7At3g15160unknown proteinO.I.H.G.S.X.
0.5778.80.98Gma.12800.2.S1_atBE057137--8e+0At5g51030short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.5778.80.98Gma.3234.1.S1_atCD397450--6e-18At1g05500NTMC2T2.1O.I.H.G.S.X.
0.5374.20.98Gma.1837.1.S1_atAW309339--7e-9At1g71900-O.I.H.G.S.X.
0.5071.70.98Gma.1266.1.S1_a_atBU548161--2e-2At4g12650-O.I.H.G.S.X.
0.4057.10.98GmaAffx.87115.1.S1_atBI970509--1e+0At3g49020F-box family proteinO.I.H.G.S.X.
0.3650.80.98Gma.8062.1.A1_a_atBI971176--1e-7At2g21630transport protein, putativeO.I.H.G.S.X.
0.2633.90.98Gma.5135.1.S1_atCD406583--5e-44At5g23575transmembrane protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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