Co-expression analysis

Gene ID Gma.9020.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g43970: La domain-containing protein (HF=1e-14)
Module size 11 genes
NF 0.51
%ile 82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.98Gma.9020.2.S1_atAI736080--1e-14At2g43970La domain-containing proteinO.I.H.G.S.X.
0.7087.10.99GmaAffx.33620.2.S1_atBM731339--2e-14At1g51730RWD domain-containing proteinO.I.H.G.S.X.
0.5979.50.99GmaAffx.82078.1.S1_atBI424683--1e-27At3g26420ATRZ-1AO.I.H.G.S.X.
0.5474.80.98Gma.12030.3.S1_a_atBG359479--4e+0At3g47341unknown proteinO.I.H.G.S.X.
0.5374.20.99GmaAffx.85638.1.S1_atBF425777--4e-13At5g55000FIP2O.I.H.G.S.X.
0.5071.70.99GmaAffx.93491.1.S1_s_atCF809216--3e-1At4g38280unknown proteinO.I.H.G.S.X.
0.4867.70.98GmaAffx.92769.1.S1_s_atCF808494--1e-75At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.4360.60.98GmaAffx.91054.1.S1_atCF806779--2e-8At1g04230unknown proteinO.I.H.G.S.X.
0.4158.10.98GmaAffx.55210.2.S1_atBE330623--3e-32At2g43070protease-associated (PA) domain-containing proteinO.I.H.G.S.X.
0.3650.80.99Gma.6579.2.S1_atAW233874--2e-8At5g28220bindingO.I.H.G.S.X.
0.3548.60.98GmaAffx.34491.1.S1_atBE820865--9e-13At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29413286_3112.2G.R9G1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage