Co-expression analysis

Gene ID	Gma.8705.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g65430: zinc finger protein-related (HF=1e-23)
Module size	7 genes
NF	0.50
%ile	80.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	91.5	0.98	Gma.8705.1.S1_at	BQ742642	-	-	1e-23	At1g65430	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	Gma.2520.1.S1_at	AW570245	-	-	2e-7	At2g46500	phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	Gma.6902.1.S1_a_at	CD396278	-	-	1e-12	At5g01010	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.2660.1.S1_at	BE657176	-	-	9e-13	At1g69060	heat shock protein binding	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.8578.1.S1_at	BQ079840	-	-	4e-26	At3g60150	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.9738.1.S1_at	CA938669	-	-	3e-7	At4g20330	transcription initiation factor-related	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	Gma.17071.1.S1_at	BE822434	-	-	6e-2	At1g43890	ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	95.8	GSM294047	96_3095.2F.R9F1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the wheat gene, Ta.14264.1.A1_at, orthologous to the query gene, Gma.8705.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	Ta.14264.1.A1_at	At1g65430	-	-	1e-10	At1g65430	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.40	58.4	Ta.18914.2.S1_x_at	At1g65430	-	-	6e-1	At3g62220	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.32	44.4	Ta.11688.1.S1_at	At1g65430	-	-	4e+0	At5g38220	hydrolase	O.I.	H.G.	S.X.	Please select
0.29	39.2	Ta.18914.1.A1_a_at	At1g65430	-	-	2e-1	At2g18915	LKP2 (LOV KELCH PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.25	32.1	TaAffx.31299.1.S1_at	At1g65430	-	-	2e+0	At4g03165	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	30.3	Ta.16999.1.S1_x_at	At1g65430	-	-	8e-6	At1g14290	SBH2 (SPHINGOID BASE HYDROXYLASE 2)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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