Co-expression analysis

Gene ID Gma.8678.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g53730: SRF6 (STRUBBELIG-RECEPTOR FAMILY 6) (HF=9e-37)
Module size 6 genes
NF 0.17
%ile 40.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.20.93Gma.8678.1.S1_atBE823227--9e-37At1g53730SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)O.I.H.G.S.X.
0.6080.70.92Gma.7085.1.S1_atBE820335--7e-13At3g18000XPL1 (XIPOTL 1)O.I.H.G.S.X.
0.4665.50.92Gma.5666.2.S1_atBE609637--5e-141At1g75780TUB1O.I.H.G.S.X.
0.3243.70.94Gma.6152.1.S1_atBG650202--1e-13At4g12420SKU5O.I.H.G.S.X.
0.069.00.93GmaAffx.42577.1.A1_atBU549354--6e-24At3g25500AFH1 (FORMIN HOMOLOGY 1)O.I.H.G.S.X.
0.058.00.93Gma.4904.1.S1_atBM731809--2e-35At5g10920argininosuccinate lyase, putative / arginosuccinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.9GSM238034Soybean-2601R-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.597.7GSM238056Soybean-PS46R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.397.5GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.297.4GSM238032Soybean-2601R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.197.3GSM191075Soybean_Cotyledon_EP1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.097.2GSM184826Young trifoliate leaf, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.997.1GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.997.1GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.997.1GSM201115Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.897.0GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.897.0GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.796.8GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.796.8GSM201129Whole Seed at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.796.8GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.696.7GSM238055Soybean-PS46R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.696.7GSM191076Soybean_Cotyledon_EP2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.596.6GSM201114Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.596.6GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.596.6GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.596.6GSM238059Soybean-S03W4-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.496.4GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.496.4GSM201100Laser capture microdissected (LCM) axis parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.396.2GSM182047Whole Seed at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.396.2GSM184827Young trifoliate leaf, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.396.2GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.396.2GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.296.0GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.296.0GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.296.0GSM201111Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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