Co-expression analysis

Gene ID	Gma.8536.1.S1_s_at
Gene name	bZIP transcription factor bZIP36 /// TGACG-motif-binding factor
Homology with Arabidopsis	Similar to At5g11260: HY5 (ELONGATED HYPOCOTYL 5) (HF=1e-20)
Module size	6 genes
NF	0.13
%ile	32.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	88.9	0.92	Gma.8536.1.S1_s_at	L28003.1	bZIP transcription factor bZIP36 /// TGACG-motif-binding factor	-	1e-20	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	O.I.	H.G.	S.X.	Please select
0.77	90.3	0.88	Gma.8537.1.S1_at	L28004.1	TGACG-motif-binding factor	-	2e-19	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.93	Gma.8536.1.S1_at	L28003.1	bZIP transcription factor bZIP36	-	1e-20	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.93	GmaAffx.86087.1.S1_at	BF424820	bZIP transcription factor bZIP36 /// TGACG-motif-binding factor	-	3e+0	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.90	GmaAffx.51662.1.A1_at	CD404482	-	-	5e+0	At4g21216	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.91	GmaAffx.73452.1.S1_at	BU548248	-	-	1e-10	At3g15354	SPA3 (SPA1-RELATED 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.1	99.4	GSM209597	susceptible_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.9	99.4	GSM209587	resistant_24hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
10.8	99.4	GSM209596	resistant_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
6.5	98.7	GSM170926	Rust Innoculated, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
6.3	98.6	GSM170928	V2 Control, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
5.7	98.4	GSM292576	86_1283.1H.R180U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM209581	susceptible_48hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.2	98.1	GSM170924	V2 Control, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
5.1	98.1	GSM170927	Rust Innoculated, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
4.9	98.0	GSM292578	8_1283.1H.R180L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8	97.9	GSM182044	Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
4.5	97.7	GSM170925	V2 Control, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.8	97.0	GSM182043	Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
3.6	96.7	GSM209599	susceptible_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.6	96.7	GSM170929	Rust Innoculated, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.4	96.4	GSM292614	42_1330.1I.R207P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM209590	susceptible_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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