Co-expression analysis

Gene ID	Gma.8530.1.S1_at
Gene name	seed maturation protein PM35
Homology with Arabidopsis	Similar to At4g31370: FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR) (HF=8e-2)
Module size	19 genes
NF	0.38
%ile	67.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.72	88.1	0.81	Gma.8530.1.S1_at	AF109720.1	seed maturation protein PM35	-	8e-2	At4g31370	FLA5 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.90	Gma.1502.2.S1_a_at	BI974382	glutathione S-transferase GST 14	-	5e-5	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.88	Gma.339.1.S1_s_at	AF048978.1	2,4-D inducible glutathione S-transferase	-	2e-28	At1g78340	ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.93	Gma.2433.1.S1_at	AW349260	-	-	3e-6	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.90	Gma.1502.1.S1_at	AF243369.1	glutathione S-transferase GST 14	-	5e-7	At2g29460	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.91	GmaAffx.67309.1.S1_at	BE609999	-	-	2e-8	At3g29360	UDP-glucose 6-dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.91	GmaAffx.93186.1.S1_s_at	CF808911	glutathione S-transferase GST 14	-	1e-6	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.87	GmaAffx.91971.1.S1_s_at	CF807696	-	-	1e+0	At1g18360	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.90	GmaAffx.92964.1.S1_at	CF808689	-	-	2e+0	At3g26147	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.90	GmaAffx.91037.1.S1_s_at	CF806762	-	-	4e-4	At2g41380	embryo-abundant protein-related	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.92	GmaAffx.67686.1.S1_at	BU927155	-	-	1e-3	At5g64250	2-nitropropane dioxygenase family / NPD family	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.87	GmaAffx.86629.1.S1_at	BI425555	endo-1,3-beta-glucanase	-	3e+0	At5g27370	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.91	GmaAffx.86629.2.S1_at	BQ742947	endo-1,3-beta-glucanase	-	4e+0	At3g51750	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.90	GmaAffx.11643.1.S1_at	BE658841	-	-	7e+0	At5g27820	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.91	GmaAffx.67686.2.S1_at	BI472192	-	-	1e+1	At5g22791	-	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.93	GmaAffx.38008.1.S1_at	BM177402	-	-	2e-1	At1g60640	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.89	GmaAffx.76419.1.S1_at	BE609275	-	-	6e-8	At3g19010	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.89	GmaAffx.66053.1.S1_at	AI748030	-	-	3e+0	Atmg00130	-	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.88	Gma.1502.2.S1_x_at	BI974382	glutathione S-transferase GST 14	-	5e-5	At2g29490	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	98.1	GSM294089	47_3111.2G.R9G1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM294137	90_2291.2G.R251U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2	97.4	GSM293137	4_C053.1O.R9O3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293712	48_2113.2C.R285U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM294098	55_2291.2G.R251L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293224	13_1155.1P.R097U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293268	53_C067.1P.R9P3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM293112	27_C047.1O.R9O2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294092	4_3111.2G.R9G1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293756	88_2113.2C.R285L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293209	8_C037.1O.R9O1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM294243	91_3137.2H.R9H2U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293763	9_3039.2C.R9C1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292240	49_C033.1B.R9B3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292934	15_1497.1M.R299L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293676	15_3039.2C.R9C1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293106	21_C037.1O.R9O1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294101	58_3125.2G.R9G3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294169	32_3137.2H.R9H2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292965	43_1497.1M.R299U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293294	77_C067.1P.R9P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293113	28_C047.1O.R9O2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293279	63_C065.1P.R9P2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294649	22_3221.2M.R9M1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294151	16_3139.2H.R9H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292884	5_C215.1L.R9L3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294185	47_3139.2H.R9H3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293550	64_2021.2A.R275U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292170	26-C003.1A.R9A1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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