Co-expression analysis

Gene ID Gma.8492.1.S1_at
Gene name seed maturation protein PM38
Homology with ArabidopsisSimilar to At5g22470: NAD+ ADP-ribosyltransferase (HF=1e-16)
Module size 6 genes
NF 0.95
%ile 99.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8091.50.87Gma.8492.1.S1_atAF169023.1seed maturation protein PM38-1e-16At5g22470NAD+ ADP-ribosyltransferaseO.I.H.G.S.X.
0.9198.60.78GmaAffx.59352.1.S1_atBU549305--3e-8At2g33380RD20 (RESPONSIVE TO DESSICATION 20)O.I.H.G.S.X.
0.9198.60.83Gma.8042.1.S1_atBM270037seed maturation protein PM38-5e-7At5g22470NAD+ ADP-ribosyltransferaseO.I.H.G.S.X.
0.9198.60.85GmaAffx.35664.1.S1_atBE823010--1e-2At4g02871unknown proteinO.I.H.G.S.X.
0.8392.50.78Gma.176.1.S1_atAF004810.1seed maturation protein-1e+0At4g39675unknown proteinO.I.H.G.S.X.
0.8392.50.81Gma.167.1.S1_atAF117725.1seed maturation protein-1e+0At1g10870AGD4 (ARF-GAP domain 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.799.9GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
14.599.6GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
10.399.3GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
8.999.2GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
8.599.1GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
8.099.0GSM309345transgenic RNAiOleosin, biol rep 2, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
7.999.0GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
7.799.0GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
6.898.7GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.598.7GSM201102Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.098.5GSM191078Soybean_Cotyledon_SUS2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.697.7GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM201097Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM201107Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.197.3GSM201101Laser capture microdissected (LCM) axis parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.897.0GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.796.8GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.696.7GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.496.4GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM191077Soybean_Cotyledon_SUS1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.095.6GSM147937Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.095.6GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage