Co-expression analysis

Gene ID Gma.8218.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g61880: CYP78A9 (CYTOCHROME P450 78A9) (HF=3e-11)
Module size 16 genes
NF 0.81
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.20.85Gma.8218.1.S1_atBM523279--3e-11At3g61880CYP78A9 (CYTOCHROME P450 78A9)O.I.H.G.S.X.
0.9499.20.90GmaAffx.87089.1.S1_atBM092057--7e-2At5g23810AAP7O.I.H.G.S.X.
0.9093.70.87GmaAffx.10773.1.S1_atBU926045--8e-5At5g66800unknown proteinO.I.H.G.S.X.
0.8893.40.85GmaAffx.43208.1.A1_atCD412962--2e-1At3g24050GATA transcription factor 1 (GATA-1)O.I.H.G.S.X.
0.8592.80.85Gma.15322.1.S1_atBG044778--3e+0At3g50500SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2)O.I.H.G.S.X.
0.8592.80.88GmaAffx.21782.1.A1_atAW598187--4e+0At5g24316proline-rich family proteinO.I.H.G.S.X.
0.8291.90.84GmaAffx.6553.1.S1_atCD399622--1e+0At4g25410DNA binding / transcription factorO.I.H.G.S.X.
0.8191.70.85GmaAffx.87352.1.S1_atBM524893--9e-1At4g16740ATTPS03O.I.H.G.S.X.
0.8191.70.83GmaAffx.69290.1.S1_atBU084857--3e+0At5g47190ribosomal protein L19 family proteinO.I.H.G.S.X.
0.8091.50.85Gma.5205.2.S1_atBG237396--2e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.7990.80.84GmaAffx.10755.1.S1_atBU927084--8e-1At2g02500ISPDO.I.H.G.S.X.
0.7890.60.81GmaAffx.37152.1.S1_atBM307869--3e+0At4g10845unknown proteinO.I.H.G.S.X.
0.6986.80.90Gma.7646.2.S1_atBU965216--4e-9At5g51560leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.6886.40.85GmaAffx.39719.1.S1_atBG509204--9e-2At5g61660glycine-rich proteinO.I.H.G.S.X.
0.6181.80.85GmaAffx.71745.1.S1_atBE330199--2e-33At4g04890PDF2 (PROTODERMAL FACTOR 2)O.I.H.G.S.X.
0.5778.80.87GmaAffx.77211.1.S1_atCD407284--5e-3At1g53160SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.199.7GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
16.699.6GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
16.499.6GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
16.399.6GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
15.499.6GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
14.999.6GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
13.999.6GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
12.799.5GSM258505Soybean shoot apical meristem, 6 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
12.799.5GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
12.299.5GSM258500Soybean shoot apical meristem, 6 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
11.699.4GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
10.799.4GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
9.299.2GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
9.099.2GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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