Co-expression analysis

Gene ID Gma.8131.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g48000: ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4) (HF=4e-50)
Module size 16 genes
NF 0.63
%ile 91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6986.80.90Gma.8131.2.S1_atBQ297889--4e-50At3g48000ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4)O.I.H.G.S.X.
0.7990.80.92GmaAffx.53712.1.S1_atBF715842--7e-5At1g71480nuclear transport factor 2 (NTF2) family proteinO.I.H.G.S.X.
0.7790.30.94Gma.14215.1.S1_a_atAW734483--9e-1At2g40020-O.I.H.G.S.X.
0.7689.70.94GmaAffx.53712.2.A1_atBG511668--8e-1At1g71480nuclear transport factor 2 (NTF2) family proteinO.I.H.G.S.X.
0.6986.80.93GmaAffx.29294.2.S1_atCA799036--3e+0At3g62650unknown proteinO.I.H.G.S.X.
0.6986.80.95Gma.13108.1.S1_atCD396006--2e-12At5g43750unknown proteinO.I.H.G.S.X.
0.6786.10.94Gma.84.1.S1_atBI701577--5e-3At3g08010ATAB2O.I.H.G.S.X.
0.6786.10.94GmaAffx.34785.13.S1_atBQ299659--2e-2At3g55250unknown proteinO.I.H.G.S.X.
0.6181.80.93GmaAffx.76796.1.S1_atBF325308--3e+0At5g02220unknown proteinO.I.H.G.S.X.
0.5979.50.95Gma.16790.1.S1_atCD407030--1e+0At2g24460-O.I.H.G.S.X.
0.5576.30.93Gma.9399.1.S1_atCD390357--6e-4At3g45140LOX2 (LIPOXYGENASE 2)O.I.H.G.S.X.
0.5374.20.95GmaAffx.82511.2.S1_atAW830928--3e-21At2g27680aldo/keto reductase family proteinO.I.H.G.S.X.
0.5172.30.95Gma.15006.1.A1_atCD405964--4e+0At2g12875unknown proteinO.I.H.G.S.X.
0.4867.70.94Gma.12775.1.S1_atCD406675--9e-6At3g26070plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.4766.60.95GmaAffx.60768.1.S1_atBU545873--3e-27At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.4360.60.94Gma.13267.1.A1_atCD395378--3e-4At2g27680aldo/keto reductase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.899.4GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.899.4GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.699.4GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.699.4GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
11.699.4GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.099.4GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
11.099.4GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
10.999.4GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
10.499.3GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.899.3GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.199.2GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
9.199.2GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.299.0GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.698.9GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.698.9GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.498.9GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.398.9GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.398.9GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.498.6GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.298.6GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
6.298.6GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
6.198.5GSM170924V2 Control, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
6.198.5GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.998.5GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.798.4GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.798.4GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.698.3GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
5.698.3GSM238053Soybean-PS46R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.698.3GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.698.3GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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