Co-expression analysis

Gene ID Gma.8052.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g28310: unknown protein (HF=9e-45)
Module size 6 genes
NF 0.49
%ile 80.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.90.95Gma.8052.1.S1_atBU547615--9e-45At2g28310unknown proteinO.I.H.G.S.X.
0.6786.10.96Gma.12193.2.S1_a_atCA801551--7e-32At1g24764ATMAP70-2 (microtubule-associated proteins 70-2)O.I.H.G.S.X.
0.5071.70.97Gma.4001.1.S1_atBI424053--4e-11At1g05570CALS1 (CALLOSE SYNTHASE 1)O.I.H.G.S.X.
0.4665.50.96Gma.11095.1.S1_atCD417393--4e-30At3g51950zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3853.30.97Gma.7184.1.S1_atCA819425--2e-16At5g05410DREB2AO.I.H.G.S.X.
0.3040.40.96Gma.4946.1.S1_atCD394258--2e-5At3g10730sad1/unc-84-like 2 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.598.9GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
7.498.9GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
7.498.9GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
7.098.8GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.998.8GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.798.7GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.798.7GSM258505Soybean shoot apical meristem, 6 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.798.7GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.498.6GSM258500Soybean shoot apical meristem, 6 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.498.6GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
6.198.5GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.998.5GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.898.4GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.598.3GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.498.2GSM191075Soybean_Cotyledon_EP1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.198.1GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.198.1GSM191076Soybean_Cotyledon_EP2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.098.0GSM182042Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.897.9GSM182047Whole Seed at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.897.9GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.897.9GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.497.6GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.497.6GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM191083Soybean_Cotyledon_EPD1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.297.4GSM182048Whole Seed at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.197.3GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.097.2GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
3.997.1GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.997.1GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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