Co-expression analysis

Gene ID Gma.7876.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g20060: UBC19 (ubiquitin-conjugating enzyme19) (HF=1e+0)
Module size 6 genes
NF 0.38
%ile 67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8091.50.97Gma.7876.1.S1_atBU550811--1e+0At3g20060UBC19 (ubiquitin-conjugating enzyme19)O.I.H.G.S.X.
0.6786.10.98Gma.7257.2.S1_s_atBG155489--1e-8At4g15960catalytic/ epoxide hydrolaseO.I.H.G.S.X.
0.5576.30.98Gma.7257.2.S1_atBG155489--1e-8At4g15960catalytic/ epoxide hydrolaseO.I.H.G.S.X.
0.5071.70.98Gma.11164.1.S1_atAW350722Peroxisomal 3-ketoacyl-CoA thiolase precursor-1e-85At1g04710PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4)O.I.H.G.S.X.
0.2329.90.98Gma.1106.1.S1_atCD416163--1e-1At5g53330-O.I.H.G.S.X.
0.1417.50.98Gma.2300.2.S1_atBM887591--1e-18At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.296.0GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.296.0GSM2931374_C053.1O.R9O3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29337258_1547.1Q.R070L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29340890_C079.1Q.R9Q2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM29273075_C165.1J.R9J1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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