Co-expression analysis

Gene ID Gma.7813.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g49870: ATARLA1C (ADP-ribosylation factor-like A1C) (HF=6e-76)
Module size 17 genes
NF 0.26
%ile 50.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.80.97Gma.7813.2.S1_atBE660328--6e-76At3g49870ATARLA1C (ADP-ribosylation factor-like A1C)O.I.H.G.S.X.
0.3650.80.98Gma.706.2.S1_atCA783193--1e-3At4g10360-O.I.H.G.S.X.
0.2839.00.99Gma.1995.1.S1_atAW164508--4e-23At3g12760-O.I.H.G.S.X.
0.2735.70.98Gma.1429.1.S1_atCD416437--2e-5At1g04555unknown proteinO.I.H.G.S.X.
0.2735.70.98Gma.5720.2.S1_s_atBG652626--2e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.2633.90.98Gma.2211.2.S1_atBM520077--1e-9At3g53520UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1)O.I.H.G.S.X.
0.2633.90.98Gma.2618.1.S1_atCD411855--7e-28At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.H.G.S.X.
0.2532.60.98GmaAffx.71638.1.S1_atBE440902--2e-13At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.2532.60.99GmaAffx.22932.1.S1_atBI316684--1e-28At2g01060myb family transcription factorO.I.H.G.S.X.
0.2329.90.99GmaAffx.89525.1.S1_s_atCK606517--3e-26At2g39840TOPP4O.I.H.G.S.X.
0.2228.10.98Gma.824.2.S1_atBM954008--2e-6At1g76660-O.I.H.G.S.X.
0.2025.10.98Gma.8009.2.S1_atBI424216--5e-31At2g38610KH domain-containing proteinO.I.H.G.S.X.
0.2025.10.98Gma.5720.3.S1_s_atAW760166--2e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.1923.70.98Gma.8227.3.S1_atCA953304--1e-3At2g26590adhesion regulating molecule familyO.I.H.G.S.X.
0.1721.20.98GmaAffx.73239.1.S1_atBF325442--9e-38At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.1417.50.98GmaAffx.85225.1.S1_atAI900872--3e-23At3g06300AT-P4H-2 (A. THALIANA P4H ISOFORM 2)O.I.H.G.S.X.
0.1013.00.97Gma.6079.1.S1_atCD397253--2e-4At1g06110SKIP16 (SKP1/ASK-interacting protein 16)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage