Co-expression analysis

Gene ID Gma.7758.1.A1_at
Gene name inducer of CBF expression 4
Homology with ArabidopsisSimilar to At5g07571: - (HF=8e-1)
Module size 20 genes
NF 0.21
%ile 44.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8191.70.89Gma.7758.1.A1_atBG239421inducer of CBF expression 4-8e-1At5g07571-O.I.H.G.S.X.
0.4968.30.92GmaAffx.64474.1.A1_atBE661146--1e-6At1g20760calcium-binding EF hand family proteinO.I.H.G.S.X.
0.3346.10.93GmaAffx.25527.1.S1_atBM525182--3e+0At4g38800ATMTN1O.I.H.G.S.X.
0.3243.70.97GmaAffx.5824.1.A1_s_atBQ298207--3e+0At5g64670ribosomal protein L15 family proteinO.I.H.G.S.X.
0.3040.40.93GmaAffx.93594.1.S1_atCF809319--6e-46At1g16680DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putativeO.I.H.G.S.X.
0.2939.00.92GmaAffx.92032.1.S1_atCF807757--1e+0At5g5460050S ribosomal protein L24, chloroplast (CL24)O.I.H.G.S.X.
0.2633.90.97Gma.105.1.S1_atU70535.1SGF14C-2e-44At2g42590GRF9 (GENERAL REGULATORY FACTOR 9)O.I.H.G.S.X.
0.2329.90.95GmaAffx.93289.1.S1_atCF809014--2e-33At3g26370unknown proteinO.I.H.G.S.X.
0.2228.10.94GmaAffx.89933.1.S1_atCF805658--7e-8At3g46820TOPP5O.I.H.G.S.X.
0.2126.60.97GmaAffx.91487.1.S1_s_atCF807212elongation factor 1A SMV resistance-related protein-2e-114At5g60390elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.2126.60.97Gma.13580.1.S1_s_atBQ611050Tubulin A-1e-116At1g50010TUA2O.I.H.G.S.X.
0.1923.70.93HgAffx.18703.1.S1_atCA940477--4e+0At5g5671060S ribosomal protein L31 (RPL31C)O.I.H.G.S.X.
0.1721.20.96Gma.12800.1.A1_atCD390548--2e-1At5g25752RBL11 (RHOMBOID-LIKE PROTEIN 11)O.I.H.G.S.X.
0.1417.50.95GmaAffx.91615.1.S1_atCF807340--9e-5At1g09020SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4)O.I.H.G.S.X.
0.1316.30.97Gma.2534.2.S1_s_atCD393721--2e-76At4g02890UBQ14O.I.H.G.S.X.
0.1013.00.96GmaAffx.72771.1.A1_atBG511599--4e-26At1g10240FRS11 (FAR1-related sequence 11)O.I.H.G.S.X.
0.0811.00.96Gma.17283.1.A1_atAW310940--5e+0At5g44120CRA1 (CRUCIFERINA)O.I.H.G.S.X.
0.0811.00.97Gma.11398.2.A1_s_atCD413467--2e-21At1g70490ARFA1DO.I.H.G.S.X.
0.0710.20.94GmaAffx.75745.1.S1_s_atBM520040--7e-5At5g60980nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.0710.20.94Gma.8061.1.A1_atBQ786710--3e-8At3g46450SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.998.5GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.698.3GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.498.2GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.498.2GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.398.2GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.298.1GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.198.1GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.198.1GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.098.0GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.998.0GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.998.0GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.797.8GSM201097Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.797.8GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.597.7GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.597.7GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.497.6GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.497.6GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.497.6GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.397.5GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.397.5GSM147956Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM201113Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.397.5GSM147943Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.397.5GSM147954Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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