Co-expression analysis

Gene ID	Gma.7501.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g19390: pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein (HF=4e-4)
Module size	9 genes
NF	0.12
%ile	32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.94	99.2	0.96	Gma.7501.1.A1_at	BU548144	-	-	4e-4	At5g19390	pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.1334.1.S1_at	BI784940	-	-	3e-11	At5g49930	emb1441 (embryo defective 1441)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.97	Gma.1753.1.S1_a_at	CD405404	-	-	4e-67	At2g32730	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.97	Gma.1189.1.S1_at	CD409559	-	-	3e-11	At5g27540	MIRO1 (Miro-related GTP-ase 1)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.97	GmaAffx.40858.1.S1_at	BU548508	-	-	1e-41	At2g20190	CLASP (CLIP-ASSOCIATED PROTEIN)	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.97	Gma.12412.1.S1_at	BG651526	-	-	9e+0	At5g53905	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.97	Gma.5341.1.S1_at	AW310277	-	-	5e-25	At4g13730	RabGAP/TBC domain-containing protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.97	Gma.3619.1.S1_at	AW831066	-	-	1e+0	At1g13770	-	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.97	Gma.4801.1.S1_s_at	BU548608	-	-	3e-42	At3g46820	TOPP5	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	97.0	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.8	97.0	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.5	96.6	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.4	96.4	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.2	96.0	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.1	95.8	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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