Co-expression analysis

Gene ID Gma.7259.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g24160: PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN) (HF=3e-3)
Module size 6 genes
NF 0.34
%ile 62.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5678.20.98Gma.7259.1.S1_atCD398809--3e-3At3g24160PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN)O.I.H.G.S.X.
0.5778.80.98Gma.4379.1.S1_x_atCD393195--1e-23At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)O.I.H.G.S.X.
0.5576.30.98Gma.1434.1.S1_atAW349400--0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.3243.70.98Gma.13321.1.S1_atCD392393--1e-14At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.1822.30.98Gma.13295.1.S1_atCD412186--9e-46At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.1822.30.98Gma.4037.1.S1_atAW309605--2e-177At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.1067.2.A1_at, orthologous to the query gene, Gma.7259.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5674.4Zm.1067.2.A1_atAt3g24160vacuolar ATP synthase 16 kDa proteolipid subunit-2e-56At1g75630AVA-P4O.I.H.G.S.X.
0.6582.1Zm.14877.1.S1_atAt3g24160--1e+0At1g59700ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)O.I.H.G.S.X.
0.5976.1Zm.4965.1.A1_atAt3g24160cyclase/dehydrase family protein-2e-1At5g46790unknown proteinO.I.H.G.S.X.
0.5571.6Zm.326.1.S1_atAt3g24160response regulator 7-3e+0At5g41761unknown proteinO.I.H.G.S.X.
0.5369.1Zm.14115.1.A1_atAt3g24160hypothetical protein LOC100278990-2e+0At5g19750peroxisomal membrane 22 kDa family proteinO.I.H.G.S.X.
0.5166.4Zm.18825.1.A1_atAt3g24160hypothetical protein LOC100194340-8e+0At3g17675copper ion binding / electron carrierO.I.H.G.S.X.
0.4759.9Zm.16794.1.A1_atAt3g24160isopentenyl pyrophosphate isomerase-7e-35At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.4658.4Zm.5947.1.A1_atAt3g24160--3e+0At2g16490XH domain-containing proteinO.I.H.G.S.X.
0.4556.4Zm.2631.1.S1_atAt3g24160hypothetical protein LOC100191885-5e-5At2g21730CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2)O.I.H.G.S.X.
0.4149.7Zm.5207.1.S1_atAt3g24160hypothetical protein LOC100192596-5e-23At4g03120proline-rich family proteinO.I.H.G.S.X.
0.4149.7Zm.12528.1.A1_atAt3g24160hypothetical protein LOC100274560-3e+0At5g50740metal ion bindingO.I.H.G.S.X.
0.4048.5Zm.520.1.S1_x_atAt3g24160cellulose synthase-4-2e-74At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.H.G.S.X.
0.4048.5Zm.1806.1.A1_atAt3g24160--3e-1At5g44900transmembrane receptorO.I.H.G.S.X.
0.3742.3Zm.16829.3.S1_atAt3g24160--4e+0At5g55240caleosin-related family protein / embryo-specific protein, putativeO.I.H.G.S.X.
0.3538.9Zm.11255.1.S1_atAt3g24160hypothetical protein LOC100217136-3e-32At5g40200DegP9 (DegP protease 9)O.I.H.G.S.X.
0.3233.4Zm.4182.1.S1_atAt3g24160hypothetical protein LOC100276027-1e-4At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.2622.7Zm.13771.1.A1_atAt3g24160hypothetical protein LOC100216812-1e-17At1g72710CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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