Co-expression analysis

Gene ID	Gma.7159.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g14690: CYP72A15 (HF=1e+0)
Module size	6 genes
NF	0.17
%ile	39.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	78.2	0.96	Gma.7159.1.A1_at	BU545176	-	-	1e+0	At3g14690	CYP72A15	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	GmaAffx.81888.1.S1_at	BE210383	serine/threonine kinase-related protein	-	5e-7	At4g23270	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	Gma.10384.1.S1_at	BE658298	mitogen-activated protein kinase kinase MAPKK2	-	4e+0	At4g02210	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.96	Gma.6558.1.S1_at	BU084402	-	-	2e-6	At1g36160	ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	GmaAffx.39725.1.S1_at	BI945410	-	-	8e-1	At3g57280	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.6708.1.A1_at	BQ610551	-	-	3e-4	At1g67890	protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.9289.1.A1_at, orthologous to the query gene, Gma.7159.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.38	44.2	Zm.9289.1.A1_at	At3g14690	-	-	1e-6	At3g14680	CYP72A14	O.I.	H.G.	S.X.	Please select
0.27	24.6	Zm.1920.2.A1_x_at	At3g14690	hypothetical protein AY109668 /// hypothetical protein LOC100275218	-	5e-4	At3g05550	hypoxia-responsive family protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	Zm.2726.1.S1_at	At3g14690	origin recognition complex subunit 4 /// origin recognition complex subunit 4	-	4e-3	At2g01120	ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4)	O.I.	H.G.	S.X.	Please select
0.20	14.2	Zm.2748.2.S1_at	At3g14690	-	-	2e+0	At5g54880	DTW domain-containing protein	O.I.	H.G.	S.X.	Please select
0.18	11.6	Zm.4966.1.A1_at	At3g14690	hypothetical protein LOC100278743	-	5e+0	At5g46860	VAM3	O.I.	H.G.	S.X.	Please select
0.17	10.6	Zm.19200.1.A1_at	At3g14690	-	-	7e-4	At4g02730	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.15	8.6	Zm.17243.1.A1_at	At3g14690	Hypothetical protein LOC100192864	-	1e-27	At1g30270	CIPK23 (CBL-INTERACTING PROTEIN KINASE 23)	O.I.	H.G.	S.X.	Please select
0.10	4.6	Zm.2738.1.S1_at	At3g14690	alpha-N-arabinofuranosidase A	-	2e-7	At3g10740	ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1)	O.I.	H.G.	S.X.	Please select
0.07	2.9	ZmAffx.1158.1.S1_at	At3g14690	-	-	3e+0	At5g37475	translation initiation factor-related	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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