Co-expression analysis

Gene ID	Gma.7159.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g14690: CYP72A15 (HF=1e+0)
Module size	6 genes
NF	0.17
%ile	39.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	78.2	0.96	Gma.7159.1.A1_at	BU545176	-	-	1e+0	At3g14690	CYP72A15	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	GmaAffx.81888.1.S1_at	BE210383	serine/threonine kinase-related protein	-	5e-7	At4g23270	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	Gma.10384.1.S1_at	BE658298	mitogen-activated protein kinase kinase MAPKK2	-	4e+0	At4g02210	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.96	Gma.6558.1.S1_at	BU084402	-	-	2e-6	At1g36160	ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	GmaAffx.39725.1.S1_at	BI945410	-	-	8e-1	At3g57280	unknown protein	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.6708.1.A1_at	BQ610551	-	-	3e-4	At1g67890	protein kinase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1608003_s_at, orthologous to the query gene, Gma.7159.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.79	92.7	1608003_s_at	At3g14690	hypothetical protein LOC100245388	-	4e+0	At5g63225	-	O.I.	H.G.	S.X.	Please select
0.51	73.2	1620059_x_at	At3g14690	-	-	2e+0	At1g49470	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	69.3	1619582_at	At3g14690	hypothetical protein LOC100257516	-	1e+0	At5g11330	monooxygenase family protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	1609860_at	At3g14690	-	-	7e-3	At3g61900	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	1619350_at	At3g14690	-	-	5e+0	At5g06430	thioredoxin-related	O.I.	H.G.	S.X.	Please select
0.46	66.5	1621590_at	At3g14690	-	-	9e-2	At1g10140	-	O.I.	H.G.	S.X.	Please select
0.44	64.1	1609320_x_at	At3g14690	-	-	2e-1	At4g28703	-	O.I.	H.G.	S.X.	Please select
0.44	64.1	1614348_at	At3g14690	similar to NADH dehydrogenase subunit I	-	1e-157	Atcg01100	-	O.I.	H.G.	S.X.	Please select
0.39	54.9	1618737_x_at	At3g14690	-	-	1e+0	At4g09650	ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE)	O.I.	H.G.	S.X.	Please select
0.39	54.9	1607190_at	At3g14690	-	-	1e+0	At2g35480	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.9	1610347_s_at	At3g14690	similar to NADH dehydrogenase subunit I	-	2e+0	At1g35430	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	1611528_at	At3g14690	hypothetical protein LOC100254781	-	1e+0	At5g45360	F-box family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	1607102_at	At3g14690	-	-	2e+0	At3g24506	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	1622247_at	At3g14690	hypothetical protein LOC100244197	-	3e+0	At2g28800	ALB3 (ALBINO 3)	O.I.	H.G.	S.X.	Please select
0.36	50.7	1620373_at	At3g14690	-	-	5e-6	At1g50320	ATHX	O.I.	H.G.	S.X.	Please select
0.36	50.7	1614362_at	At3g14690	-	-	8e+0	At5g44574	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	1616436_at	At3g14690	-	-	5e+0	At4g13060	F-box family protein-related	O.I.	H.G.	S.X.	Please select
0.33	45.7	1606749_s_at	At3g14690	hypothetical protein LOC100245228	-	2e-22	At5g54290	cytochrome c biogenesis protein family	O.I.	H.G.	S.X.	Please select
0.32	43.1	1614056_at	At3g14690	-	-	6e-2	At5g28090	unknown protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	1620272_at	At3g14690	hypothetical protein LOC100252883	-	2e+0	At2g37330	ALS3 (ALUMINUM SENSITIVE 3)	O.I.	H.G.	S.X.	Please select
0.26	32.0	1613558_at	At3g14690	-	-	3e+0	At5g52210	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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