Co-expression analysis

Gene ID	Gma.7129.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g20620: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.44
%ile	74.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.88	Gma.7129.1.S1_at	BU764262	-	-	1e+0	At2g20620	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.88	Gma.5395.1.S1_s_at	BU761041	-	-	3e+0	At5g41600	BTI3 (VIRB2-INTERACTING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.88	Gma.8571.1.S1_at	AW397386	-	-	3e+0	At4g14785	SCRL23 (SCR-Like 23)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.90	Gma.6773.1.S1_at	BF597514	-	-	3e-1	At1g58070	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.87	Gma.7078.1.S1_at	AW164280	-	-	3e-1	At5g28660	-	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.87	GmaAffx.62941.1.S1_at	AW597498	-	-	4e-1	At1g27740	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
32.6	99.9	GSM201119	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
32.5	99.9	GSM201118	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
14.9	99.6	GSM191080	Soybean_Cotyledon_ES2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
13.5	99.5	GSM191079	Soybean_Cotyledon_ES1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
7.5	98.9	GSM201130	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
5.0	98.0	GSM182036	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
3.8	97.0	GSM309341	Wild type 1	GSE12300	Suppression of oleosin in soybean cotyledon
3.8	97.0	GSM309342	Wild type 2	GSE12300	Suppression of oleosin in soybean cotyledon
3.6	96.7	GSM201121	Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.4	96.4	GSM182035	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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