Co-expression analysis

Gene ID	Gma.7015.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g42500: PP2A-4 (HF=3e-57)
Module size	6 genes
NF	0.23
%ile	47.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	Gma.7015.1.S1_at	CD402211	-	-	3e-57	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.7239.1.S1_at	CD392099	-	-	2e-21	At1g17720	ATB BETA	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.80314.1.S1_at	BQ785560	-	-	6e-6	At2g44950	HUB1 (HISTONE MONO-UBIQUITINATION 1)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.10860.1.S1_at	AW350087	-	-	7e-26	At4g19860	lecithin:cholesterol acyltransferase family protein / LACT family protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.6832.1.S1_at	BU550964	-	-	1e-11	At1g20880	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.16294.1.S1_at	CD413154	-	-	1e-44	At1g69340	appr-1-p processing enzyme family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1611714_at, orthologous to the query gene, Gma.7015.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	1611714_at	At2g42500	hypothetical protein LOC100264866	-	2e-61	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.75	91.3	1609364_at	At2g42500	similar to thioredoxin-related protein	-	8e-6	At3g56580	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	1622665_s_at	At2g42500	hypothetical protein LOC100246461	-	5e+0	At5g19257	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	84.7	1611538_at	At2g42500	hypothetical protein LOC100258505	-	3e-12	At2g35630	MOR1 (MICROTUBULE ORGANIZATION 1)	O.I.	H.G.	S.X.	Please select
0.57	79.8	1612328_at	At2g42500	hypothetical protein LOC100247770	-	6e+0	At5g07510	GRP14	O.I.	H.G.	S.X.	Please select
0.56	79.4	1616820_at	At2g42500	-	-	2e-1	At3g27835	-	O.I.	H.G.	S.X.	Please select
0.53	75.2	1618126_at	At2g42500	hypothetical protein LOC100261549	-	3e-8	At1g76660	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	1615059_at	At2g42500	hypothetical protein LOC100246880	-	2e+0	At2g20463	-	O.I.	H.G.	S.X.	Please select
0.46	66.5	1612954_at	At2g42500	hypothetical protein LOC100257012	-	4e-1	At3g55070	-	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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