Co-expression analysis

Gene ID	Gma.7015.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g42500: PP2A-4 (HF=3e-57)
Module size	6 genes
NF	0.23
%ile	47.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	Gma.7015.1.S1_at	CD402211	-	-	3e-57	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.7239.1.S1_at	CD392099	-	-	2e-21	At1g17720	ATB BETA	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.80314.1.S1_at	BQ785560	-	-	6e-6	At2g44950	HUB1 (HISTONE MONO-UBIQUITINATION 1)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.10860.1.S1_at	AW350087	-	-	7e-26	At4g19860	lecithin:cholesterol acyltransferase family protein / LACT family protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.6832.1.S1_at	BU550964	-	-	1e-11	At1g20880	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.16294.1.S1_at	CD413154	-	-	1e-44	At1g69340	appr-1-p processing enzyme family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.11919.2.S1_at, orthologous to the query gene, Gma.7015.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.88	94.4	TaAffx.11919.2.S1_at	At2g42500	-	-	5e-46	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.42	60.9	Ta.6555.3.S1_a_at	At2g42500	-	-	4e+0	At5g54790	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	44.4	TaAffx.106849.3.S1_at	At2g42500	-	-	1e-1	At4g39410	WRKY13	O.I.	H.G.	S.X.	Please select
0.30	40.9	Ta.26748.1.S1_at	At2g42500	-	-	4e-1	At2g38630	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	Ta.9084.3.S1_at	At2g42500	-	-	1e+1	At5g50050	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.24	30.3	TaAffx.95075.1.S1_at	At2g42500	-	-	1e+0	At2g01818	zinc ion binding	O.I.	H.G.	S.X.	Please select
0.23	29.0	Ta.5445.2.S1_x_at	At2g42500	-	-	1e-6	At5g56170	-	O.I.	H.G.	S.X.	Please select
0.22	27.1	TaAffx.30673.1.S1_at	At2g42500	-	-	7e-11	At4g25630	FIB2 (FIBRILLARIN 2)	O.I.	H.G.	S.X.	Please select
0.21	25.5	TaAffx.11110.1.S1_x_at	At2g42500	-	-	4e+0	At4g29650	cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolase	O.I.	H.G.	S.X.	Please select
0.21	25.5	TaAffx.84292.1.S1_at	At2g42500	-	-	2e+0	At4g05070	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	21.0	TaAffx.31791.1.S1_at	At2g42500	-	-	7e-1	At5g26717	-	O.I.	H.G.	S.X.	Please select
0.17	19.8	Ta.30013.1.S1_at	At2g42500	-	-	1e-18	At5g14390	-	O.I.	H.G.	S.X.	Please select
0.16	18.2	TaAffx.52752.1.S1_at	At2g42500	-	-	4e+0	At5g62610	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.05	6.7	Ta.14481.2.S1_x_at	At2g42500	-	-	1e+0	At5g55570	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	Ta.3036.3.S1_x_at	At2g42500	-	-	2e-1	At5g46020	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	Ta.9306.2.S1_x_at	At2g42500	-	-	6e+0	At5g46870	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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