Co-expression analysis

Gene ID	Gma.7015.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g42500: PP2A-4 (HF=3e-57)
Module size	6 genes
NF	0.23
%ile	47.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	Gma.7015.1.S1_at	CD402211	-	-	3e-57	At2g42500	PP2A-4	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.7239.1.S1_at	CD392099	-	-	2e-21	At1g17720	ATB BETA	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	GmaAffx.80314.1.S1_at	BQ785560	-	-	6e-6	At2g44950	HUB1 (HISTONE MONO-UBIQUITINATION 1)	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	Gma.10860.1.S1_at	AW350087	-	-	7e-26	At4g19860	lecithin:cholesterol acyltransferase family protein / LACT family protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.6832.1.S1_at	BU550964	-	-	1e-11	At1g20880	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.16294.1.S1_at	CD413154	-	-	1e-44	At1g69340	appr-1-p processing enzyme family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.10270.2.A1_a_at, orthologous to the query gene, Gma.7015.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	PtpAffx.10270.2.A1_a_at	At2g42500	hypothetical protein	-	2e-52	At3g58500	PP2A-3 (PROTEIN PHOSPHATASE 2A-3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	PtpAffx.134171.1.A1_s_at	At2g42500	hypothetical protein	-	1e+0	At2g21725	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	PtpAffx.113973.1.A1_s_at	At2g42500	hypothetical protein	-	7e-1	At1g77765	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	Ptp.5468.2.A1_a_at	At2g42500	-	-	2e-9	At1g07705	transcription regulator	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	PtpAffx.1199.1.A1_at	At2g42500	hypothetical protein	-	1e-20	At5g38470	DNA repair protein RAD23, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	PtpAffx.1447.3.S1_s_at	At2g42500	hypothetical protein	-	2e+1	At5g60290	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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