Co-expression analysis

Gene ID Gma.7015.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g42500: PP2A-4 (HF=3e-57)
Module size 6 genes
NF 0.23
%ile 47.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.50.98Gma.7015.1.S1_atCD402211--3e-57At2g42500PP2A-4O.I.H.G.S.X.
0.4463.30.98Gma.7239.1.S1_atCD392099--2e-21At1g17720ATB BETAO.I.H.G.S.X.
0.2126.60.98GmaAffx.80314.1.S1_atBQ785560--6e-6At2g44950HUB1 (HISTONE MONO-UBIQUITINATION 1)O.I.H.G.S.X.
0.1822.30.98Gma.10860.1.S1_atAW350087--7e-26At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.1518.70.98Gma.6832.1.S1_atBU550964--1e-11At1g20880RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1215.10.98Gma.16294.1.S1_atCD413154--1e-44At1g69340appr-1-p processing enzyme family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os10g0410600, orthologous to the query gene, Gma.7015.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6079.7Os10g0410600At2g42500-Serine/threonine protein phosphatase PP2A-4catalytic subunit (EC 3.1.3.16)2e-83At3g58500PP2A-3 (PROTEIN PHOSPHATASE 2A-3)O.I.H.G.S.X.
0.5068.0Os10g0507800At2g42500-Heat shock protein DnaJ, N-terminal domaincontaining protein5e-9At2g35720DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.5068.0Os02g0810100At2g42500-Ankyrin repeat containing protein4e-2At3g04470-O.I.H.G.S.X.
0.2727.5Os03g0166800At2g42500-Endonuclease/exonuclease/phosphatase familyprotein3e-1At1g15220CCMHO.I.H.G.S.X.
0.1915.1Os04g0503700At2g42500-DIE2/ALG10 family protein6e-8At5g02410DIE2/ALG10 familyO.I.H.G.S.X.
0.1712.6Os01g0209000At2g42500-Alg9-like mannosyltransferase family protein2e-14At1g16900sugar binding / transferase, transferring glycosyl groupsO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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