Co-expression analysis

Gene ID	Gma.6885.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g51780: ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4) (HF=2e-2)
Module size	6 genes
NF	0.52
%ile	83.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.98	Gma.6885.1.A1_at	BU545705	-	-	2e-2	At3g51780	ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	Gma.8705.1.S1_at	BQ742642	-	-	1e-23	At1g65430	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.55372.1.A1_at	BU547082	-	-	5e-6	At1g26520	-	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.8578.1.S1_at	BQ079840	-	-	4e-26	At3g60150	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.6986.2.S1_s_at	BI972259	-	-	7e-16	At1g76150	maoC-like dehydratase domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.2520.1.S1_at	AW570245	-	-	2e-7	At2g46500	phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	96.6	GSM209585	resistant_12hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.93908.1.S1_at, orthologous to the query gene, Gma.6885.1.A1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	PtpAffx.93908.1.S1_at	At3g51780	hypothetical protein	-	4e-4	At3g51780	ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	Ptp.1902.1.S1_at	At3g51780	hypothetical protein	-	2e-43	At1g28490	SYP61 (SYNTAXIN OF PLANTS 61)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	Ptp.5847.1.S1_at	At3g51780	hypothetical protein	-	5e-25	At1g50670	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	Ptp.7316.1.S1_at	At3g51780	hypothetical protein	-	6e-19	At3g02950	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	PtpAffx.67471.1.S1_at	At3g51780	hypothetical protein	-	8e-12	At3g07080	membrane protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.10	16.3	PtpAffx.212652.1.S1_x_at	At3g51780	hypothetical protein	-	1e-67	At1g65660	SMP1 (SWELLMAP 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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