Co-expression analysis

Gene ID	Gma.6813.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g23430: PHO1 (phosphate 1) (HF=5e-3)
Module size	6 genes
NF	0.50
%ile	81.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	66.6	0.95	Gma.6813.1.A1_at	AW308988	-	-	5e-3	At3g23430	PHO1 (phosphate 1)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.96	GmaAffx.85444.1.S1_at	BG405531	-	-	3e-1	At1g28630	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.96	GmaAffx.43786.2.S1_at	BU080930	-	-	4e-12	At2g17820	ATHK1 (histidine kinase 1)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.96	Gma.9511.1.S1_at	CA850830	-	-	8e-2	At5g64816	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.96	GmaAffx.46842.1.S1_at	BQ611900	-	-	2e-1	At3g17120	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.96	GmaAffx.80898.1.S1_at	BE556291	-	-	3e+0	At3g04700	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	97.0	GSM293892	42_2212.2E.R101P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293613	42_2054.2B.R307P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293790	34_2150.2D.R295P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292533	47_1288.1H.R182P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293728	62_2112.2C.R175P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293894	44_2206.2E.R018P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293996	4_2268.2F.R154P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage