Co-expression analysis

Gene ID	Gma.6570.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g30620: MUR4 (MURUS 4) (HF=6e-48)
Module size	8 genes
NF	0.52
%ile	83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	Gma.6570.1.S1_s_at	AW350797	-	-	6e-48	At1g30620	MUR4 (MURUS 4)	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.98	Gma.3568.1.S1_x_at	BI941735	-	-	1e-54	At5g10260	AtRABH1e (Arabidopsis Rab GTPase homolog H1e)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	Gma.6454.1.S1_at	BM271508	-	-	2e-90	At5g25265	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.98	Gma.10802.1.S1_a_at	BI969275	Clone GMFP1 isoprenylated protein	-	4e-12	At3g44110	ATJ3	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.98	Gma.3568.2.S1_at	BM308236	-	-	3e-42	At2g44610	RAB6A	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.16711.2.S1_at	AW201538	-	-	1e-4	At5g48335	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.10261.1.S1_at	BG839311	-	-	2e-52	At3g27090	-	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.92473.1.S1_s_at	CF809138	-	-	1e+0	At3g01360	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.7657.1.S1_s_at, orthologous to the query gene, Gma.6570.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	Ta.7657.1.S1_s_at	At1g30620	-	-	1e-18	At1g30620	MUR4 (MURUS 4)	O.I.	H.G.	S.X.	Please select
0.22	27.1	Ta.7583.1.S1_a_at	At1g30620	-	-	4e-18	At5g01010	-	O.I.	H.G.	S.X.	Please select
0.15	17.1	Ta.18418.1.S1_s_at	At1g30620	-	-	3e-1	At2g04780	FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN 7)	O.I.	H.G.	S.X.	Please select
0.08	9.4	TaAffx.9773.1.S1_s_at	At1g30620	-	-	3e-9	At1g79270	ECT8 (evolutionarily conserved C-terminal region 8)	O.I.	H.G.	S.X.	Please select
0.03	4.7	TaAffx.14312.1.S1_at	At1g30620	-	-	5e-43	At4g00660	DEAD/DEAH box helicase, putative	O.I.	H.G.	S.X.	Please select
0.03	4.7	Ta.19416.1.S1_at	At1g30620	-	-	3e-6	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage