Co-expression analysis

Gene ID	Gma.6570.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g30620: MUR4 (MURUS 4) (HF=6e-48)
Module size	8 genes
NF	0.52
%ile	83.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.98	Gma.6570.1.S1_s_at	AW350797	-	-	6e-48	At1g30620	MUR4 (MURUS 4)	O.I.	H.G.	S.X.	Please select
0.78	90.6	0.98	Gma.3568.1.S1_x_at	BI941735	-	-	1e-54	At5g10260	AtRABH1e (Arabidopsis Rab GTPase homolog H1e)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	Gma.6454.1.S1_at	BM271508	-	-	2e-90	At5g25265	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.98	Gma.10802.1.S1_a_at	BI969275	Clone GMFP1 isoprenylated protein	-	4e-12	At3g44110	ATJ3	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.98	Gma.3568.2.S1_at	BM308236	-	-	3e-42	At2g44610	RAB6A	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.16711.2.S1_at	AW201538	-	-	1e-4	At5g48335	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.10261.1.S1_at	BG839311	-	-	2e-52	At3g27090	-	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.92473.1.S1_s_at	CF809138	-	-	1e+0	At3g01360	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.34704.1.S1_at, orthologous to the query gene, Gma.6570.1.S1_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	84.2	PtpAffx.34704.1.S1_at	At1g30620	hypothetical protein	-	7e-59	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	PtpAffx.204542.1.S1_at	At1g30620	hypothetical protein	-	9e-32	At4g34940	ARO1 (ARMADILLO REPEAT ONLY 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	PtpAffx.203610.1.S1_at	At1g30620	hypothetical protein	-	1e-1	At5g02240	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	PtpAffx.66415.1.A1_s_at	At1g30620	hypothetical protein	-	9e-13	At3g07130	PAP15 (PURPLE ACID PHOSPHATASE 15)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.45	72.3	PtpAffx.85663.1.S1_at	At1g30620	hypothetical protein	-	4e-24	At5g10730	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	PtpAffx.132063.1.A1_at	At1g30620	hypothetical protein	-	5e+0	Atmg01400	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.39	64.6	PtpAffx.208986.1.S1_at	At1g30620	hypothetical protein	-	2e-26	At1g68750	ATPPC4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	PtpAffx.24380.1.A1_at	At1g30620	porin/voltage-dependent anion-selective channel protein	-	1e+0	At3g49920	VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	Ptp.2292.1.A1_s_at	At1g30620	hypothetical protein	-	4e-125	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.18	30.8	PtpAffx.207540.1.S1_at	At1g30620	-	-	2e-8	At5g04830	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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