Co-expression analysis

Gene ID Gma.6555.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g27250: CLV3 (CLAVATA3) (HF=5e+0)
Module size 11 genes
NF 0.69
%ile 94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6282.10.95Gma.6555.1.S1_atBM954521--5e+0At2g27250CLV3 (CLAVATA3)O.I.H.G.S.X.
0.7890.60.97GmaAffx.78434.1.S1_atBG041904--2e+0At5g47530auxin-responsive protein, putativeO.I.H.G.S.X.
0.7689.70.97GmaAffx.6438.3.S1_atBE611653WRKY19 protein-3e-26At5g07100WRKY26O.I.H.G.S.X.
0.7388.90.97GmaAffx.6438.3.S1_s_atBE611653WRKY19 protein /// WRKY62 protein-3e-26At5g07100WRKY26O.I.H.G.S.X.
0.7187.80.96Gma.11486.1.A1_atBG511169--3e+0At2g44400DC1 domain-containing proteinO.I.H.G.S.X.
0.7087.10.96GmaAffx.85374.1.S1_atBI317002--2e-7At5g49760leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.6986.80.97GmaAffx.33296.1.S1_atBM522949--4e-4At1g68710haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.6483.40.96GmaAffx.6438.1.S1_atBM176963WRKY19 protein-1e+1At5g48595-O.I.H.G.S.X.
0.6080.70.96GmaAffx.17811.1.S1_atBI426517--2e-3At1g54730sugar transporter, putativeO.I.H.G.S.X.
0.5474.80.97GmaAffx.92329.1.S1_atCF808054--3e+0At5g15802unknown proteinO.I.H.G.S.X.
0.5374.20.97PsAffx.psHB004xD12f_atPsAffx.psHB004xD12f--3e-1At2g46620AAA-type ATPase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.398.6GSM29404796_3095.2F.R9F1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM2940075_3095.2F.R9F1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM2449349_SLO.I2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.497.6GSM29279353_C197.1K.R9K3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM24487432_CON.I2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.097.2GSM29235928_C099.1F.V7F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM24479714_VP9.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.897.0GSM29248986_C125.1G.R9G3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29254255_C135.1H.R9H2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM2449093_VP9.I3L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.696.7GSM24487331_VP9.I3L4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.696.7GSM29396521_2245.2F.R272L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM24489036_SLO.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.696.7GSM29382061_3057.2D.R9D1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29380245_3067.2D.R9D3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM29279151_1403.1K.R250L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.596.6GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM29426622_2417.2I.R236L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.496.4GSM24477810_CON.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.396.2GSM29251833_1305.1H.R192L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29353550_3005.2A.R9A1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM24479113_SLO.I2W1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.396.2GSM29228734_1171.1E.R106L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29284221_1443.1L.R271L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29422575_2365.2H.R095L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM29427226_2427.2I.R297L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM29271259_1385.1J.R240L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM24479313_VP9.I2W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.195.8GSM29251026_1317.1H.R200L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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