Co-expression analysis

Gene ID Gma.6495.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g25800: PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2) (HF=5e-51)
Module size 8 genes
NF 0.48
%ile 78.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4665.50.98Gma.6495.1.S1_atBQ612701--5e-51At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.5979.50.99GmaAffx.51048.1.S1_s_atBM521698--6e-5At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.5778.80.98Gma.5762.1.S1_atU12735.1aminoalcoholphosphotransferase-2e-47At1g13560AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1)O.I.H.G.S.X.
0.4463.30.98Gma.1623.1.S1_atCD404324--3e-50At2g20580RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A)O.I.H.G.S.X.
0.4360.60.99Gma.4208.2.S1_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.
0.4259.30.98Gma.11133.1.S1_s_atCD396940--2e-28At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.3650.80.99Gma.8060.1.S1_atBG725572--1e-10At1g51710UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6)O.I.H.G.S.X.
0.3243.70.99Gma.4208.2.S1_x_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.698.3GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.698.3GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
5.498.2GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
4.697.7GSM267287Axillary meristem from 10-day-old soybean seedlings GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
3.897.0GSM258496Vegetative soybean shoot apical meristemGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM258501Soybean shoot apical meristem, 1 short-day treatment replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.696.7GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.496.4GSM258497Soybean Shoot Apical Meristem, 1 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258500Soybean shoot apical meristem, 6 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.396.2GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.296.0GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.195.8GSM258498Soybean shoot apical meristem, 2 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeansLink to GEO
3.195.8GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.095.6GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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