Co-expression analysis

Gene ID Gma.6141.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g60960: IRT3 (HF=2e-18)
Module size 11 genes
NF 0.17
%ile 39.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.10.96Gma.6141.1.S1_atBM523097--2e-18At1g60960IRT3O.I.H.G.S.X.
0.3650.80.97GmaAffx.74241.2.A1_atBU549198--9e-5At1g75130CYP721A1O.I.H.G.S.X.
0.3142.20.97GmaAffx.50646.1.A1_atAW310451--1e+1At5g14560unknown proteinO.I.H.G.S.X.
0.2430.90.97Gma.635.1.A1_atBG046815--1e+0At1g65295unknown proteinO.I.H.G.S.X.
0.2025.10.97GmaAffx.58176.1.S1_atBU577254--3e-1At2g39540gibberellin-regulated family proteinO.I.H.G.S.X.
0.1417.50.97Gma.9043.1.S1_s_atBQ299017--9e-1At1g43640AtTLP5 (TUBBY LIKE PROTEIN 5)O.I.H.G.S.X.
0.1417.50.97GmaAffx.87777.1.S1_atAW734930--4e-19At1g30110ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25)O.I.H.G.S.X.
0.1316.30.97Gma.14025.1.A1_atCD413970--7e-4At1g32440PKp3 (plastidial pyruvate kinase 3)O.I.H.G.S.X.
0.1114.20.97Gma.13263.1.A1_atCD394450--5e-1At2g25190unknown proteinO.I.H.G.S.X.
0.1013.00.97Gma.10847.2.S1_atBE800382--4e-10At1g26440ATUPS5 (ARABIDOPSIS THALIANA UREIDE PERMEASE 5)O.I.H.G.S.X.
0.0811.00.97Gma.12931.1.S1_atCD396295--1e+0At5g08100L-asparaginase / L-asparagine amidohydrolaseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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