Co-expression analysis

Gene ID	Gma.6053.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g17330: ECT6 (evolutionarily conserved C-terminal region 6) (HF=1e-23)
Module size	7 genes
NF	0.20
%ile	42.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.96	Gma.6053.1.S1_at	CA852593	-	-	1e-23	At3g17330	ECT6 (evolutionarily conserved C-terminal region 6)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.97	Gma.7655.1.S1_at	BQ629122	-	-	5e-37	At2g22670	IAA8	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.97	Gma.12442.1.S1_at	BE822323	-	-	5e-1	At1g19870	iqd32 (IQ-domain 32)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.97	GmaAffx.49059.1.S1_at	AW596835	-	-	8e-67	At3g51850	CPK13	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.97	Gma.13580.2.S1_x_at	AW780839	tubulin A	-	3e-139	At1g50010	TUA2	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	GmaAffx.65064.1.S1_at	CA800739	-	-	7e-6	At5g03250	phototropic-responsive NPH3 family protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.97	Gma.14524.1.S1_at	BE020189	-	-	9e-24	At5g53480	importin beta-2, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.5	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.9	98.5	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.9	98.5	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.4	98.2	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.2	98.1	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.0	98.0	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.8	97.9	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.6	97.7	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.6	97.7	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
4.4	97.6	GSM258500	Soybean shoot apical meristem, 6 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.3	97.5	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
4.1	97.3	GSM258505	Soybean shoot apical meristem, 6 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.0	97.2	GSM237069	Soy_shoot apical meristem2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.7	96.8	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.1	95.8	GSM309529	storage protein suppression expt, RNAi biol rep1, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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