Co-expression analysis

Gene ID Gma.595.1.S1_at
Gene name beta-amylase
Homology with ArabidopsisSimilar to At2g32290: BAM6 (BETA-AMYLASE 6) (HF=2e-11)
Module size 15 genes
NF 0.45
%ile 75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.79Gma.595.1.S1_atAB004271.1beta-amylase-2e-11At2g32290BAM6 (BETA-AMYLASE 6)O.I.H.G.S.X.
0.6483.40.86Gma.16677.1.S1_atCD418377--1e+0At5g63087-O.I.H.G.S.X.
0.5778.80.87Gma.7270.1.S1_atCD415919--4e-55At3g29320glucan phosphorylase, putativeO.I.H.G.S.X.
0.5576.30.84GmaAffx.89045.1.A1_s_atCK605938--4e-19At1g11545xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.5576.30.88Gma.1281.1.S1_atBM092139--1e-1At5g24230-O.I.H.G.S.X.
0.4867.70.83Gma.1281.2.S1_atBG510307--2e+0At4g26210mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.
0.4259.30.88GmaAffx.59377.2.S1_atBE347738--1e-9At1g12600-O.I.H.G.S.X.
0.4057.10.88GmaAffx.59377.1.S1_atBM528731--2e-30At1g12600-O.I.H.G.S.X.
0.3650.80.82Gma.1547.2.S1_a_atCA800377DnaJ-like protein-3e-6At1g56300DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3548.60.91GmaAffx.67291.1.S1_atBE608448--3e-1At2g47950unknown proteinO.I.H.G.S.X.
0.3346.10.90Gma.7612.1.S1_atBE824030--4e-14At1g07080gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinO.I.H.G.S.X.
0.3346.10.89GmaAffx.45053.1.S1_s_atBF597282--3e-18At3g18800unknown proteinO.I.H.G.S.X.
0.3142.20.89Gma.5300.1.S1_atBM092172--6e-28At1g74520ATHVA22AO.I.H.G.S.X.
0.2329.90.83Gma.9322.1.A1_atBI969538--3e+0At4g14730transmembrane protein-relatedO.I.H.G.S.X.
0.2126.60.90Gma.16358.2.S1_atAW317745--9e-4At2g15490UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.099.6GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.699.6GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.299.6GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.199.6GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.099.6GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.099.6GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
12.799.5GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
12.599.5GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
12.099.4GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
11.999.4GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
8.699.1GSM309345transgenic RNAiOleosin, biol rep 2, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
8.599.1GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
3.396.2GSM238055Soybean-PS46R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.396.2GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.195.8GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.095.6GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.095.6GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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