Co-expression analysis

Gene ID	Gma.5783.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g55260: PPX2 (PROTEIN PHOSPHATASE X 2) (HF=1e-59)
Module size	15 genes
NF	0.43
%ile	73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	83.4	0.97	Gma.5783.3.S1_a_at	BM271247	-	-	1e-59	At5g55260	PPX2 (PROTEIN PHOSPHATASE X 2)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	GmaAffx.26272.1.S1_at	BE330107	-	-	6e-36	At1g43190	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	GmaAffx.69670.1.S1_at	BQ742118	-	-	7e-5	At4g22670	AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.90745.1.S1_s_at	CF806470	-	-	4e+0	At5g42235	Expressed protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.82131.1.S1_at	BQ473196	-	-	2e-2	At4g14860	atofp11 (Arabidopsis thaliana ovate family protein 11)	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.67700.1.S1_at	CB063625	-	-	9e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.8643.2.S1_at	BG652817	-	-	1e-9	At3g09740	SYP71 (SYNTAXIN OF PLANTS 71)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.4382.3.S1_at	CA784372	-	-	9e-18	At1g18470	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.40419.1.S1_at	BF325410	-	-	1e-11	At3g03570	-	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	GmaAffx.73085.1.S1_at	AW459316	-	-	2e-6	At2g41760	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.15087.2.S1_at	CA800369	-	-	1e-94	At4g28860	ckl4 (Casein Kinase I-like 4)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	Gma.9193.1.S1_at	BE473615	-	-	1e-22	At1g43130	LCV2 (LIKE COV 2)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.22482.1.S1_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.98	GmaAffx.22482.1.S1_x_at	AW185059	-	-	1e-28	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	GmaAffx.81052.2.S1_at	BM528722	-	-	6e-39	At3g58500	PP2A-3 (PROTEIN PHOSPHATASE 2A-3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	95.8	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293060	61_C034.1N.R9N3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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